CF504218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_SULIY (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=psmA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.124e-13 Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+ +F I ++G G+ +D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_SULIN (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=psmA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.124e-13 Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+ +F I ++G G+ +D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_SULIM (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=psmA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.124e-13 Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+ +F I ++G G+ +D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_SULIL (Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=psmA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.124e-13 Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+ +F I ++G G+ +D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_SULIK (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=psmA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.124e-13 Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+ +F I ++G G+ +D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_SULIA (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27) GN=psmA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.124e-13 Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR ITIFSP+G L+QV+YAF+AVK G T+IG++ K V + ++K+ LLD S+ +F I ++G G+ +D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVK-KGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_PICTO (Proteasome subunit alpha OS=Picrophilus torridus GN=psmA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.124e-13 Identity = 36/78 (46.15%), Postives = 56/78 (71.79%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+GRLFQVEYA +AVK G T++G++ KD V ++++KKV +L++ TS+ + I + + +G+ AD Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVK-KGSTALGIKFKDGVALISEKKVRSRLVEKTSLEKIQLIDDRVAAVTSGLVAD 84
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7_DICDI (Proteasome subunit alpha type-7 OS=Dictyostelium discoideum GN=psmA7 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.124e-13 Identity = 37/82 (45.12%), Postives = 52/82 (63.41%), Query Frame = 3 Query: 90 SGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 S YDR IT+FSP+G LFQVEYA +AV+ G ++GVRGKD + + +KK KL D S+ + + ++ L G+TAD Sbjct: 2 SSARYDRAITVFSPDGHLFQVEYAMEAVR-KGTVAVGVRGKDVIVLGVEKKATAKLQDARSIRKIVKLDDHICLTFAGLTAD 82
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_METS5 (Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=psmA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.998e-13 Identity = 36/79 (45.57%), Postives = 56/79 (70.89%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR ITIFSP+G L+QV+YAF+AVK G T++GV+ K++V ++ +KK +LLD S+ +F + ++G G+ +D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVK-KGWTTLGVKTKNAVVILGEKKKASQLLDVDSIEKVFLLDDHVGCSFAGLASD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7_TRYBB (Proteasome subunit alpha type-7 OS=Trypanosoma brucei brucei GN=PSA4 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12 Identity = 34/78 (43.59%), Postives = 54/78 (69.23%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+G LFQVEYA +AV+ G+ ++GV+GKDS+ +KK KL D + ++ + +++ L + G++AD Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVR-KGLCAVGVKGKDSIIFAVEKKSVQKLQDSRTTRKIYKLDEHIYLASAGLSAD 79 The following BLAST results are available for this feature:
BLAST of CF504218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504218 ID=CF504218; Name=CF504218; organism=Citrus sinensis; type=EST; length=336bpback to top |