CF504218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA5B_ARATH (Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.364e-12 Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR + FSPEGRLFQVEYA +A+K G T+IGV+ K+ V + +K++ LL+ +SV + I ++G +G+ AD Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIK-LGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIAD 84
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA5A_ARATH (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.364e-12 Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR + FSPEGRLFQVEYA +A+K G T+IGV+ K+ V + +K++ LL+ +SV + I ++G +G+ AD Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIK-LGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIAD 84
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_THEGJ (Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.782e-12 Identity = 34/79 (43.04%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ K V + +K++ +L++ +S +F I ++ +G+ AD Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVK-RGATAVGVKWKGGVVLAVEKRITSRLIEPSSYEKIFQIDDHIAAAPSGIIAD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.782e-12 Identity = 34/78 (43.59%), Postives = 53/78 (67.95%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+GRLFQVEYA +AVK G T++G++ ++ V + K+V KL++ S+ ++ I ++G G+ AD Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVK-RGTTALGIKVEEGVVLGVDKRVTSKLIEPESIEKVYQIDTHIGAATAGLVAD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA5_SOYBN (Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.782e-12 Identity = 34/78 (43.59%), Postives = 53/78 (67.95%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR + FSPEGRLFQVEYA +A+K G T+IG++ K+ V + +K++ LL+ +SV + I +++G +G+ AD Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIK-LGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIAD 84
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA5_MOUSE (Proteasome subunit alpha type-5 OS=Mus musculus GN=Psma5 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.782e-12 Identity = 32/78 (41.03%), Postives = 52/78 (66.67%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR + FSPEGRLFQVEYA +A+K G T+IG++ + VC+ +K++ L++ +S+ + I ++G +G+ AD Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIK-LGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIAD 84
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA5_HUMAN (Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 1.782e-12 Identity = 32/78 (41.03%), Postives = 52/78 (66.67%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR + FSPEGRLFQVEYA +A+K G T+IG++ + VC+ +K++ L++ +S+ + I ++G +G+ AD Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIK-LGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIAD 84
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA5_BOVIN (Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.782e-12 Identity = 32/78 (41.03%), Postives = 52/78 (66.67%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR + FSPEGRLFQVEYA +A+K G T+IG++ + VC+ +K++ L++ +S+ + I ++G +G+ AD Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIK-LGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIAD 84
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA3_DROME (Proteasome subunit alpha type-3 OS=Drosophila melanogaster GN=Prosalpha7 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.782e-12 Identity = 35/81 (43.21%), Postives = 53/81 (65.43%), Query Frame = 3 Query: 93 GGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 G GYD + FSP+GR+FQ++YA KAV+ +G T IG+RGKD+V + +K + KL + + +F I K +G+ G+ AD Sbjct: 5 GTGYDLSASQFSPDGRVFQIDYASKAVEKSG-TVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIEKNIGMAVAGLVAD 84
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA1_HALMA (Proteasome subunit alpha 1 OS=Haloarcula marismortui GN=psmA1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.039e-12 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR ITIFSP+GRL+QVEYA +AVK G SIGVR D V + K++ L++ +SV + ++G+ + G AD Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVK-RGTASIGVRTSDGVVLAVDKRIRSPLMERSSVEKIHKADDHIGIASAGHVAD 86 The following BLAST results are available for this feature:
BLAST of CF504218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504218 ID=CF504218; Name=CF504218; organism=Citrus sinensis; type=EST; length=336bpback to top |