CF504218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 3.969e-12 Identity = 34/78 (43.59%), Postives = 54/78 (69.23%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+GRLFQVEYA +AVK G T++G++ + V +++ KK+ KL++ S+ + I Y+ + +G+ AD Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVK-KGSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLVAD 84
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.969e-12 Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ + V + +K++ +L++ S +F I ++ ++G+ AD Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVK-RGATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIAD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSJ (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica GN=PAD1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.969e-12 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D SV + + ++ L G+ AD Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVR-KGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKAD 80
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSI (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. indica GN=PAD1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.969e-12 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D SV + + ++ L G+ AD Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVR-KGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKAD 80
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7B_ARATH (Proteasome subunit alpha type-7-B OS=Arabidopsis thaliana GN=PAD2 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 3.969e-12 Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D S + + ++ L G+ AD Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVR-KGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKIVSLDNHIALACAGLKAD 80
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7A_ARATH (Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.969e-12 Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D S + + ++ L G+ AD Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVR-KGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKIVSLDNHIALACAGLKAD 80
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 5.184e-12 Identity = 34/78 (43.59%), Postives = 54/78 (69.23%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+GRLFQVEYA +AVK G T++G++ + V +++ KKV +L++ S+ + I Y+ + +G+ AD Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVK-KGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVAD 84
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_SULAC (Proteasome subunit alpha OS=Sulfolobus acidocaldarius GN=psmA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.184e-12 Identity = 34/79 (43.04%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR ITIFSP+G L+QV+YAF+AVK G T++GV+ K V ++ +K+ +LLD + +F + ++G G+ +D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVK-RGWTTLGVKTKSGVVLLAEKRKATQLLDVDGIEKIFMLDDHVGCTFAGLASD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.184e-12 Identity = 34/78 (43.59%), Postives = 51/78 (65.38%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSPEGRL+QVEYA +AV+ G T+IG+ KD V + +++ KL+ S+ +F I ++ +G+ AD Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVR-RGTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKIFQIDDHVAAATSGLVAD 85
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_HALSA (Proteasome subunit alpha OS=Halobacterium salinarium GN=psmA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.184e-12 Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR ITIFSP+GRL+QVEYA +AVK G SIGVR + V +V K+ LL+ +SV L I ++G + G AD Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVK-RGTASIGVRTPEGVVLVVDKQTRSPLLEGSSVEKLHKIDDHVGAASAGHVAD 86 The following BLAST results are available for this feature:
BLAST of CF504218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504218 ID=CF504218; Name=CF504218; organism=Citrus sinensis; type=EST; length=336bpback to top |