CF504218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_HALS3 (Proteasome subunit alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=psmA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.184e-12 Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR ITIFSP+GRL+QVEYA +AVK G SIGVR + V +V K+ LL+ +SV L I ++G + G AD Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVK-RGTASIGVRTPEGVVLVVDKQTRSPLLEGSSVEKLHKIDDHVGAASAGHVAD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7_SOLLC (Proteasome subunit alpha type-7 OS=Solanum lycopersicum GN=PAD1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.184e-12 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D SV + + ++ L G+ AD Sbjct: 4 YDRAITVFSPDGHLFQVEYAMEAVR-KGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSVRKIVNLDDHIALACAGLKAD 80
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7_CARAU (Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.184e-12 Identity = 36/78 (46.15%), Postives = 53/78 (67.95%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+G LFQVEYA +AVK G T++G+RGKD V + +KK KL + +V + + +++ + G+TAD Sbjct: 5 YDRAITVFSPDGHLFQVEYAQEAVK-KGSTAVGIRGKDIVVLGVEKKSVAKLQEERTVRKICALDEHVCMAFAGLTAD 81
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_SULTO (Proteasome subunit alpha OS=Sulfolobus tokodaii GN=psmA PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 6.771e-12 Identity = 35/79 (44.30%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR ITIFSP+G L+QV+YAF+AVK G T++GV+ K V ++ +K+ +LLD S+ +F + ++G G+ +D Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVK-KGWTTLGVKTKAGVVLIGEKRKATQLLDVDSIEKVFILDDHVGCSFAGLASD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.771e-12 Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GYDR IT+FSP+GRLFQV YA +AVK G T++GV+ + V + +K++ +L++ S +F I ++ ++G+ AD Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVK-RGATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKIFQIDDHIAAASSGIIAD 86
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7_MOUSE (Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.771e-12 Identity = 38/78 (48.72%), Postives = 51/78 (65.38%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+G LFQVEYA +AVK G T++GVRGKD V + +KK KL D +V + + + + G+TAD Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVK-KGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTAD 79
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7_CHICK (Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.771e-12 Identity = 38/78 (48.72%), Postives = 51/78 (65.38%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+G LFQVEYA +AVK G T++GVRGKD V + +KK KL D +V + + + + G+TAD Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVK-KGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTAD 79
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7_BOVIN (Proteasome subunit alpha type-7 OS=Bos taurus GN=PSMA7 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.771e-12 Identity = 38/78 (48.72%), Postives = 51/78 (65.38%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+G LFQVEYA +AVK G T++GVRGKD V + +KK KL D +V + + + + G+TAD Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVK-KGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTAD 79
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA5_YEAST (Proteasome component PUP2 OS=Saccharomyces cerevisiae GN=PUP2 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 6.771e-12 Identity = 33/78 (42.31%), Postives = 52/78 (66.67%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR ++ FSPEGRLFQVEY+ +A+K G T+IG+ K+ V + +K+ LL+ S+ + I +++G +G+TAD Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIK-LGSTAIGIATKEGVVLGVEKRATSPLLESDSIEKIVEIDRHIGCAMSGLTAD 84
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA2_CARAU (Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 6.771e-12 Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 99 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 GY +T FSP G+L Q+EYA AV AAG S+G++ + V + T+KK L D SV + PITK++G++ +GM D Sbjct: 5 GYSFSLTTFSPSGKLVQIEYALAAV-AAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKIEPITKHIGMVYSGMGPD 82 The following BLAST results are available for this feature:
BLAST of CF504218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504218 ID=CF504218; Name=CF504218; organism=Citrus sinensis; type=EST; length=336bpback to top |