CF504218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7_CICAR (Proteasome subunit alpha type-7 OS=Cicer arietinum GN=PAD1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.843e-12 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D SV + + ++ L G+ AD Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVR-KGNAAVGVRGTDNVVLGVEKKSTAKLQDTRSVRKIVNLDDHIALACAGLKAD 80
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7_CAEEL (Proteasome subunit alpha type-7 OS=Caenorhabditis elegans GN=pas-4 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.843e-12 Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR ITIFSP+G LFQVEYA +AVK G T++GVRGKD + + +KK L D ++ + I ++ L G++AD Sbjct: 4 YDRAITIFSPDGHLFQVEYAQEAVK-KGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSAD 80
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7B_XENLA (Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-B PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11 Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+G LFQVEYA +AVK G T++GVRGK+ V + +KK KL D +V + + + + + G+TAD Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVK-KGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTAD 79
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11 Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+G LFQVEYA +AVK G T++GVRGK+ V + +KK KL D +V + + + + + G+TAD Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVK-KGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTAD 79
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSJ (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. japonica GN=Os08g0548900 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11 Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D S+ + + ++ L G+ AD Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVR-KGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKAD 80
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSI (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. indica GN=OsI_029135 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11 Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 102 YDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK KL D S+ + + ++ L G+ AD Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVR-KGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKAD 80
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA3_RAT (Proteasome subunit alpha type-3 OS=Rattus norvegicus GN=Psma3 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11 Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 3 Query: 93 GGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 G GYD + FSP+GR+FQVEYA KAV+ + T+IG+R KD V +K V KL + S LF + +++G+ G+ AD Sbjct: 5 GTGYDLSASTFSPDGRVFQVEYAMKAVENSS-TAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLAD 84
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA3_MOUSE (Proteasome subunit alpha type-3 OS=Mus musculus GN=Psma3 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11 Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 3 Query: 93 GGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 G GYD + FSP+GR+FQVEYA KAV+ + T+IG+R KD V +K V KL + S LF + +++G+ G+ AD Sbjct: 5 GTGYDLSASTFSPDGRVFQVEYAMKAVENSS-TAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLAD 84
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA3_HUMAN (Proteasome subunit alpha type-3 OS=Homo sapiens GN=PSMA3 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11 Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 3 Query: 93 GGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 G GYD + FSP+GR+FQVEYA KAV+ + T+IG+R KD V +K V KL + S LF + +++G+ G+ AD Sbjct: 5 GTGYDLSASTFSPDGRVFQVEYAMKAVENSS-TAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLAD 84
BLAST of CF504218 vs. ExPASy Swiss-Prot
Match: PSA3_BOVIN (Proteasome subunit alpha type-3 OS=Bos taurus GN=PSMA3 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.155e-11 Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 3 Query: 93 GGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTAD 335 G GYD + FSP+GR+FQVEYA KAV+ + T+IG+R KD V +K V KL + S LF + +++G+ G+ AD Sbjct: 5 GTGYDLSASTFSPDGRVFQVEYAMKAVENSS-TAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLAD 84 The following BLAST results are available for this feature:
BLAST of CF504218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504218 ID=CF504218; Name=CF504218; organism=Citrus sinensis; type=EST; length=336bpback to top |