CF504219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2A6_WHEAT (Protein H2A.6 OS=Triticum aestivum GN=H2A-3 PE=2 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 2.426e-35 Identity = 74/103 (71.84%), Postives = 82/103 (79.61%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 +RSVKAGLQFPVGRIGRYLKKGRY+Q VG+GAP GNAA+DNKK RIIPRH+LLAVRND+ELG+LLAGVTIAHGGV+PNIN VLLPK Sbjct: 14 TRSVKAGLQFPVGRIGRYLKKGRYAQAVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIIPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINSVLLPK 116
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2A7_ARATH (Probable histone H2A.7 OS=Arabidopsis thaliana GN=At5g59870 PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.573e-34 Identity = 73/103 (70.87%), Postives = 82/103 (79.61%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 S+S+KAGLQFPVGRI R+LKKGRY+QR+G GAP GNAARDNKK+RIIPRH+LLA+RNDEELGKLL+GVTIAHGGVLPNIN VLLPK Sbjct: 26 SKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPK 128
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2A5_ARATH (Probable histone H2A.5 OS=Arabidopsis thaliana GN=At5g27670 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 2.966e-33 Identity = 72/103 (69.90%), Postives = 78/103 (75.73%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 S+SVKAGLQFPVGRI RYLKKGRY+ R G+GAP GNAARDNKKNRI PRH+ LA+RNDEELG+LL GVTIA GGVLPNINPVLLPK Sbjct: 27 SKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPK 129
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2A3_VOLCA (Histone H2A-III OS=Volvox carteri PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.127e-32 Identity = 69/103 (66.99%), Postives = 77/103 (74.76%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 SRS KAGLQFPVGRI RYLKKG+Y++R+G GAP GNAARDNKKNRI+PRH+ LA+RNDEELGKLL VTIA GGVLPNI+ VLLPK Sbjct: 16 SRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGDVTIASGGVLPNIHAVLLPK 118
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2A_CHLRE (Histone H2A OS=Chlamydomonas reinhardtii GN=H2A-II PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.472e-32 Identity = 69/103 (66.99%), Postives = 77/103 (74.76%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 SRS KAGLQFPVGRI RYLKKG+Y++R+G GAP GNAARDNKKNRI+PRH+ LA+RNDEELGKLL VTIA GGVLPNI+ VLLPK Sbjct: 16 SRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGEVTIASGGVLPNIHAVLLPK 118
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2A4_VOLCA (Histone H2A-IV OS=Volvox carteri PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.923e-32 Identity = 69/103 (66.99%), Postives = 77/103 (74.76%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 500 SRS KAGLQFPVGRI RYLKKG+Y++R+G GAP GNAARDNKKNRI+PRH+ LA+RNDEELGKLL VTIA GGVLPNI+ VLLPK Sbjct: 16 SRSSKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGDVTIASGGVLPNIHAVLLPK 118
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2AX_TETTH (Histone H2A.X OS=Tetrahymena thermophila GN=HTA1 PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 5.594e-32 Identity = 67/102 (65.69%), Postives = 76/102 (74.51%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLP 497 SRS +AGLQFPVGRI R+LK GRYS+RVGTGAP GNAA+DNKK RI+PRH+LLA+RNDEEL KL+A TIA GGVLPNINP+LLP Sbjct: 21 SRSARAGLQFPVGRISRFLKHGRYSERVGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHILLAIRNDEELNKLMANTTIADGGVLPNINPMLLP 122
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2A1_TETTH (Histone H2A.1 OS=Tetrahymena thermophila GN=HTA2 PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 5.594e-32 Identity = 66/102 (64.71%), Postives = 76/102 (74.51%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLP 497 SRS +AGLQFPVGRI R+LK GRYS+R+GTGAP GNAA+DNKK RI+PRH+LLA+RNDEEL KL+A TIA GGVLPNINP+LLP Sbjct: 21 SRSARAGLQFPVGRISRFLKNGRYSERIGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHILLAIRNDEELNKLMANTTIADGGVLPNINPMLLP 122
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2A1_TETPY (Histone H2A.1 OS=Tetrahymena pyriformis GN=HTA2 PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 5.594e-32 Identity = 66/102 (64.71%), Postives = 76/102 (74.51%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLP 497 SRS +AGLQFPVGRI R+LK GRYS+R+GTGAP GNAA+DNKK RI+PRH+LLA+RNDEEL KL+A TIA GGVLPNINP+LLP Sbjct: 21 SRSARAGLQFPVGRISRFLKNGRYSERIGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHILLAIRNDEELNKLMANTTIADGGVLPNINPMLLP 122
BLAST of CF504219 vs. ExPASy Swiss-Prot
Match: H2AX_TETPY (Histone H2A.X OS=Tetrahymena pyriformis GN=HTA1 PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 7.306e-32 Identity = 66/102 (64.71%), Postives = 76/102 (74.51%), Query Frame = 3 Query: 192 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLP 497 SRS +AGLQFPVGRI R+LK GRYS+R+GTGAP GNAA+DNKK RI+PRH+LLA+RNDEEL KL+A TIA GGVLPNINP+LLP Sbjct: 21 SRSARAGLQFPVGRISRFLKHGRYSERIGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHILLAIRNDEELNKLMANTTIADGGVLPNINPMLLP 122 The following BLAST results are available for this feature:
BLAST of CF504219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504219 ID=CF504219; Name=CF504219; organism=Citrus sinensis; type=EST; length=502bpback to top |