CF504223

Overview
NameCF504223
Unique NameCF504223
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length269
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8732 contig Csv1_Contig8732:527..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504223 vs. ExPASy Swiss-Prot
Match: INO1_HUMAN (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.498e-27
Identity = 57/89 (64.04%), Postives = 72/89 (80.90%), Query Frame = 2
Query:    2 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 268
            +VLHNTCEDSLLAAPI+LDL LL EL  R+    + + +  +FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENILRACVGL P+
Sbjct:  411 LVLHNTCEDSLLAAPIMLDLALLTELCQRVSFCTDMDPEPQTFHPVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENILRACVGLPPQ 499          
BLAST of CF504223 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.721e-26
Identity = 56/89 (62.92%), Postives = 70/89 (78.65%), Query Frame = 2
Query:    2 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 268
            +VLHNTCEDSLLAAPI+LDLVLL EL  R+    + + +   FH V ++LS+L KAPLVPPG+PVVNAL +QR+ +ENI RACVGL P+
Sbjct:  411 LVLHNTCEDSLLAAPIMLDLVLLTELCQRVSFCTDSDPEPQGFHTVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENIFRACVGLPPQ 499          
BLAST of CF504223 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.860e-26
Identity = 56/89 (62.92%), Postives = 69/89 (77.53%), Query Frame = 2
Query:    2 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE 268
            +VLHNTCEDSLLAAPI+LDL LL EL  R+    + +    SFHPV ++L +L KAPL PPG+PVVNAL +QR+ +ENILRACVGL P+
Sbjct:  411 LVLHNTCEDSLLAAPIMLDLALLTELCQRVSFCTDVDPDPQSFHPVLSLLGFLFKAPLAPPGSPVVNALFRQRSCIENILRACVGLPPQ 499          
BLAST of CF504223 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 7.018e-25
Identity = 59/90 (65.56%), Postives = 72/90 (80.00%), Query Frame = 2
Query:    2 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLK-AEGEGK-FHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAP 265
            +V+HNTCEDSLLA P+ILDLV+L ELSTRIQL+ AE E   +  F PV ++LSYL KAPLVP G+ VVN+L +QRA +ENILR C+GL P
Sbjct:  415 LVIHNTCEDSLLATPLILDLVILGELSTRIQLRNAEKESAPWVPFKPVLSLLSYLCKAPLVPQGSQVVNSLFRQRAAIENILRGCIGLPP 504          
BLAST of CF504223 vs. ExPASy Swiss-Prot
Match: INO1_YEAST (Inositol-3-phosphate synthase OS=Saccharomyces cerevisiae GN=INO1 PE=1 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 2.583e-19
Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 2
Query:    2 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKA-----EGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGL 259
            I +HN CEDSLLA P+I+DL+++ E  TR+  K      E  GKF +F+PV T LSY  KAPL  PG   VN L+KQR  LEN LR  +GL
Sbjct:  430 ISIHNVCEDSLLATPLIIDLLVMTEFCTRVSYKKVDPVKEDAGKFENFYPVLTFLSYWLKAPLTRPGFHPVNGLNKQRTALENFLRLLIGL 520          
BLAST of CF504223 vs. ExPASy Swiss-Prot
Match: INO1_CANAL (Inositol-3-phosphate synthase OS=Candida albicans GN=INO1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.583e-19
Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 2
Query:    2 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGL 259
            I +HN CEDSLLA P+I+DLV+  E +TR+Q+K  G+  +   +PVA++LSY  KAPL  PG   +N L+KQR  L N+L   VGL
Sbjct:  422 ISIHNVCEDSLLATPLIIDLVVATEFATRVQVKGPGKSDYDELYPVASLLSYWLKAPLARPGFKPINGLNKQRQQLVNLLSVLVGL 507          
BLAST of CF504223 vs. ExPASy Swiss-Prot
Match: INO1_CANGA (Inositol-3-phosphate synthase OS=Candida glabrata GN=INO1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.856e-18
Identity = 44/93 (47.31%), Postives = 60/93 (64.52%), Query Frame = 2
Query:    2 IVLHNTCEDSLLAAPIILDLVLLAELSTRIQLK-------AEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGL 259
            I +HN CEDSLLA P+I+DL+++ E  +R+  +       AE +G F +F+PV + LSY  KAPL  PG   +N L+KQR  LEN LR  +GL
Sbjct:  433 ISIHNVCEDSLLATPLIIDLIVMTEFCSRVTYRNVDGQDGAEAKGDFENFYPVLSFLSYWLKAPLTKPGYQPINGLNKQRTALENFLRLLIGL 525          
The following BLAST results are available for this feature:
BLAST of CF504223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_HUMAN7.498e-2764.04Inositol-3-phosphate synthase 1 OS=Homo sapiens GN... [more]
INO1_MOUSE3.721e-2662.92Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]
INO1_BOVIN4.860e-2662.92Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]
INO1_DROME7.018e-2565.56Inositol-3-phosphate synthase OS=Drosophila melano... [more]
INO1_YEAST2.583e-1952.75Inositol-3-phosphate synthase OS=Saccharomyces cer... [more]
INO1_CANAL2.583e-1951.16Inositol-3-phosphate synthase OS=Candida albicans ... [more]
INO1_CANGA2.856e-1847.31Inositol-3-phosphate synthase OS=Candida glabrata ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-712 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504223 ID=CF504223; Name=CF504223; organism=Citrus sinensis; type=EST; length=269bp
CATTGTGCTGCACAACACGTGTGAGGACTCTCTTTTGGCTGCTCCAATCA
TTCTAGATTTGGTTCTGCTGGCTGAACTCAGCACCAGGATCCAGCTCAAA
GCTGAAGGAGAGGGAAAATTCCACTCTTTCCACCCTGTGGCTACAATTCT
CAGCTACCTCACCAAGGCTCCTCTGGTCCCTCCAGGCACACCAGTGGTGA
ATGCGCTGTCGAAGCAGCGTGCAATGCTTGAGAACATTCTGAGGGCTTGC
GTTGGCTTGGCTCCTGAGA
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