CF504225

Overview
NameCF504225
Unique NameCF504225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length381
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.861e-18
Identity = 50/114 (43.86%), Postives = 71/114 (62.28%), Query Frame = 1
Query:   49 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK-DLVKWVCSTLDQKGVDHVLDPKLDC---CFKEEICKGLNIGLLC 378
            +ADFG+AK+VD     +  + +AGS GYIAPEY Y++++ EKSD+YS+GVV+LE++TG+ P+DP   E   LV WV      +G   VLD  L        +E+ + L   LLC
Sbjct:  935 IADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIHLVDWV---RQNRGSLEVLDSTLRSRTEAEADEMMQVLGTALLC 1045          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.880e-18
Identity = 47/116 (40.52%), Postives = 74/116 (63.79%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVD-PEFGEKDLVKWVCSTLDQKGVDHVLDPKL---DCCFKEEICKGLNIGLLC 378
            ARV+DFG+A+++ A     S+S +AG+ GY+ PEY  + R + K D+YS+GVV+LEL+TG+ P D P+FG+ +LV WV      + +  V DP+L   D   + E+ + L + + C
Sbjct: 1023 ARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSPDFGDNNLVGWVKQHAKLR-ISDVFDPELMKEDPALEIELLQHLKVAVAC 1137          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 6.373e-18
Identity = 46/117 (39.32%), Postives = 73/117 (62.39%), Query Frame = 1
Query:   49 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEF-GEKDLVKWVCSTLDQKG-VDHVLDPKL-----DCCFKEEICKGLNIGLLC 378
            ++DFG+AK++D S      + + G+ GY+APE A+T   + +SD+YS+GVV+LEL+T +  +DP F GE D+V WV S   Q G +  ++DP L     D    E++ + L++ L C
Sbjct:  958 ISDFGIAKLLDQSATSIPSNTVQGTIGYMAPENAFTTVKSRESDVYSYGVVLLELITRKKALDPSFNGETDIVGWVRSVWTQTGEIQKIVDPSLLDELIDSSVMEQVTEALSLALRC 1074          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.420e-17
Identity = 51/115 (44.35%), Postives = 71/115 (61.74%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPK--LDCCFKEEICKGLNIGLLCT 381
            A ++DFG+AK + AS K  + + + G+ GYI PEYA T R+NEKSDIYSFG+V+LEL+TG+  VD    E +L + + S  D   V   +DP+  + C     I K   + LLCT
Sbjct:  787 AHLSDFGIAKSIPAS-KTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKKAVD---NEANLHQLILSKADDNTVMEAVDPEVTVTCMDLGHIRKTFQLALLCT 897          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.854e-17
Identity = 46/97 (47.42%), Postives = 70/97 (72.16%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVD---PEFGEKDLVKWVCSTLDQKGVDHVLDPKL 324
            A+V+DFG+AK++ +     +  V+ G+ GY+APEYA T  +NEKSDIYSFG++I+E++TGR PVD   P+ GE +LV W+ S +  +  + V+DPK+
Sbjct:  294 AKVSDFGLAKLLGSESSYVTTRVM-GTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQ-GETNLVDWLKSMVGNRRSEEVVDPKI 388          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.422e-17
Identity = 44/96 (45.83%), Postives = 65/96 (67.71%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDP-EFGE-KDLVKWVCSTLDQKGVDHVLDPKL 324
            ARV+DFG+A++V A     S+S +AG+ GY+ PEY  + R   K D+YS+GV++LEL++G+ P+DP EFGE  +LV W      +K    +LDP+L
Sbjct:  999 ARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNNLVGWAKQLYREKRGAEILDPEL 1094          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.422e-17
Identity = 44/96 (45.83%), Postives = 65/96 (67.71%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDP-EFGE-KDLVKWVCSTLDQKGVDHVLDPKL 324
            ARV+DFG+A++V A     S+S +AG+ GY+ PEY  + R   K D+YS+GV++LEL++G+ P+DP EFGE  +LV W      +K    +LDP+L
Sbjct: 1001 ARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGEDNNLVGWAKQLYREKRGAEILDPEL 1096          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.163e-17
Identity = 49/115 (42.61%), Postives = 68/115 (59.13%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD---LVKWVCSTLDQKGVDHVLDPKL-DCCFKEEICKGLNIGLLC 378
            +VADFG+A+++ A     S +VIAG+ GYI PEY  + R   K D+YSFGV++LELVTG+ P  P+F E +   LV W    ++Q     V+DP L     K    + L I +LC
Sbjct: 1058 KVADFGLARLISACESHVS-TVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLC 1171          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.131e-17
Identity = 50/122 (40.98%), Postives = 74/122 (60.66%), Query Frame = 1
Query:   49 VADFGVAKVVDAS-------GKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEF-GEKDLVKWVCSTL-DQKGVDHVLDPKLD---CCFKEEICKGLNIGLLC 378
            +ADFG+A+ +           KP +   +AGS GY+APE+A   R+ EKSD+YS+GVV+LE++TG+ P+DP+  G   LVKWV   L ++K    +LDP+LD        E+ + L +  LC
Sbjct:  899 LADFGLARTISGYPNTGIDLAKPTNRPPMAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGKHPLDPDLPGGAHLVKWVRDHLAEKKDPSRLLDPRLDGRTDSIMHEMLQTLAVAFLC 1020          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.131e-17
Identity = 45/97 (46.39%), Postives = 69/97 (71.13%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVD--PEFGEKDLVKWVCSTLDQKGVDHVLDPKLD 327
            A+++DFG+AK++D SG+    + + G+ GY+APEYA T  +NEKSDIYSFGV++LE +TGR PVD      E +LV+W+   +  +  + V+DP+L+
Sbjct:  323 AKLSDFGLAKLLD-SGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPRLE 418          
The following BLAST results are available for this feature:
BLAST of CF504225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
RCH2_ARATH2.861e-1843.86Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
BRI1_ARATH4.880e-1840.52Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
RPK1_IPONI6.373e-1839.32Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
ERL1_ARATH1.420e-1744.35LRR receptor-like serine/threonine-protein kinase ... [more]
Y1154_ARATH1.854e-1747.42Probable serine/threonine-protein kinase At1g01540... [more]
BRL3_ARATH2.422e-1745.83Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
BRL1_ARATH2.422e-1745.83Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
EXS_ARATH3.163e-1742.61Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y4265_ARATH4.131e-1740.98Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH4.131e-1746.39Probable receptor-like protein kinase At2g42960 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-714 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504225 ID=CF504225; Name=CF504225; organism=Citrus sinensis; type=EST; length=381bp
GAGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTGGTGCACGAGT
GGCCGATTTTGGTGTAGCCAAGGTGGTTGATGCCTCTGGAAAGCCTAAAT
CAATGTCTGTCATTGCTGGTTCCTGTGGTTACATCGCCCCAGAATATGCC
TACACACTTCGTGTGAACGAGAAGAGCGACATATACAGTTTCGGAGTAGT
CATTCTTGAGTTAGTAACTGGAAGACTGCCAGTCGATCCGGAGTTTGGGG
AGAAGGATTTGGTCAAATGGGTCTGCTCTACTTTGGATCAGAAAGGAGTG
GACCATGTTCTTGATCCCAAACTCGATTGCTGTTTTAAGGAAGAAATATG
CAAGGGCCTCAACATTGGCCTACTCTGCACT
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