CF504225

Overview
NameCF504225
Unique NameCF504225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length381
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 1.986e-11
Identity = 41/118 (34.75%), Postives = 73/118 (61.86%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD----LVKWVCSTLDQKGVDHVLDPKLDCCFKE-EICKGLNIGLLCT 381
            A V DFG+AK+++ +    + +V  G+ G+IAPEY  T + +EK+D++ +GV++LEL+TG+   D      D    L+ WV   L +K ++ ++D +L+  + E E+ + + + LLCT
Sbjct:  435 AVVGDFGLAKLMNYNDSHVTTAV-RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCT 551          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.986e-11
Identity = 41/118 (34.75%), Postives = 68/118 (57.63%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTG----RLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDP---KLDCCFKEEICKGLNIGLLC 378
            +VADFG+A++ D        S + G+ GY+APEYA   + + KSD+YSFGV++LE+++G    +L  + E  E++L  +V     +     ++DP     +     E+ K ++IGLLC
Sbjct:  485 KVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGKSNKKLEKEEEEEEEELPAFVWKRWIEGRFAEIIDPLAAPSNNISINEVMKLIHIGLLC 602          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.593e-11
Identity = 42/118 (35.59%), Postives = 71/118 (60.17%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVD-PEFGEKD---LVKWVCSTLDQKGVDHVLDPKLDCCF-KEEICKGLNIGLLCT 381
            A V DFG+AK+VD   +    + + G+ G+IAPEY  T + +E++D++ +G+++LELVTG+  +D     E+D   L+  V     +K +  ++D  LD  + KEE+   + + LLCT
Sbjct:  431 AVVGDFGLAKLVDVR-RTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLCT 547          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.593e-11
Identity = 41/116 (35.34%), Postives = 69/116 (59.48%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGR--LPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPK-LDCCFKEEICKGLNIGLLCT 381
            A+VADFG +K++    K +  +++ G+ GY+ PEY  T  +NEKSD+YSFGVV++EL++G+  L  +     K LV +  S  ++  +  ++D + L+    +EI +   I   CT
Sbjct:  554 AKVADFGASKLIPMD-KEQLTTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQASKHLVSYFVSATEENRLHEIIDDQVLNEDNLKEIQEAARIAAECT 668          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.593e-11
Identity = 38/97 (39.18%), Postives = 60/97 (61.86%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPE--FGEKDLVKWVCSTL-DQKGVDHVLDPKL 324
            A+++DFG+A+           + + G+ GY APEY  T  ++ KSD+YSFGVV+LEL++GR  +D     GE +LV W    L +++ +  V+DP+L
Sbjct:  217 AKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRL 313          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.593e-11
Identity = 39/112 (34.82%), Postives = 62/112 (55.36%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKE-EICKGLNIGLLC 378
            R+ DFG+A++ +  G     +V+ G+ GY+APE A     +  SD+++FGV++LE+V+GR P D   G   +  WV        +   +DP+L   + E E    L +GLLC
Sbjct:  506 RLGDFGLARLYER-GSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPTDS--GTFFIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLLC 614          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.593e-11
Identity = 46/124 (37.10%), Postives = 64/124 (51.61%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRL--PVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEI----------CKGLNIGLLCT 381
            ++ADFG+A+      K    + IAG+ GY+APEY    ++ EK+D+YSFGV++LE+  G       PE G      W   TL++      L   LD C K+E           CK L +GLLCT
Sbjct:  455 KIADFGLARCFGLD-KTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACGTRINAFVPETGHLLQRVWNLYTLNR------LVEALDPCLKDEFLQVQGSEAEACKVLRVGLLCT 571          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.387e-11
Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVD 237
            ARVADFG+AK     G+    + +AG+ GY+APEYA   ++ EKSD+YSFGVVILE++ GR  +D
Sbjct:  440 ARVADFGLAKQ-SREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 503          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 67.0106 bits (162), Expect = 3.387e-11
Identity = 41/115 (35.65%), Postives = 61/115 (53.04%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVD--PEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKE-EICKGLNIGLLC 378
            + +ADFG+A+++       S  ++ G+ GYI PEY        K D+YSFGVV+LEL+T + PVD     G +DL+ WV     +     V DP +     + E+ + L I  LC
Sbjct:  874 SHLADFGLARLMSPYETHVSTDLV-GTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCKPKGCRDLISWVVKMKHESRASEVFDPLIYSKENDKEMFRVLEIACLC 987          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.387e-11
Identity = 40/114 (35.09%), Postives = 65/114 (57.02%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRL--PVDPEFGEKDLVKWVCSTLDQKGVDHVLDP-KLDCCFKEEICKGLNIGLLC 378
            ++ADFG+A++       ++ S I G+ GY+APEYA   + + KSD+YSFGV++LE+++G+         G  DLV              ++DP  +D C K E+ + ++I LLC
Sbjct:  477 KLADFGLARIFGMDQTQENTSRIVGTFGYMAPEYAIHGQFSVKSDVYSFGVLVLEIISGKKNNSFYETDGAHDLVTHAWRLWSNGTALDLVDPIIIDNCQKSEVVRCIHICLLC 590          
The following BLAST results are available for this feature:
BLAST of CF504225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
SERK4_ARATH1.986e-1134.75Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
CRK37_ARATH1.986e-1134.75Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
Y5129_ARATH2.593e-1135.59Probable LRR receptor-like serine/threonine-protei... [more]
WAK3_ARATH2.593e-1135.34Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
NAK_ARATH2.593e-1139.18Probable serine/threonine-protein kinase NAK OS=Ar... [more]
LRKA3_ARATH2.593e-1134.82Lectin-domain containing receptor kinase A4.3 OS=A... [more]
CRK42_ARATH2.593e-1137.10Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
Y1105_ARATH3.387e-1153.85Probable receptor-like protein kinase At1g11050 OS... [more]
PSKR1_ARATH3.387e-1135.65Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
CRK15_ARATH3.387e-1135.09Cysteine-rich receptor-like protein kinase 15 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-714 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504225 ID=CF504225; Name=CF504225; organism=Citrus sinensis; type=EST; length=381bp
GAGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTGGTGCACGAGT
GGCCGATTTTGGTGTAGCCAAGGTGGTTGATGCCTCTGGAAAGCCTAAAT
CAATGTCTGTCATTGCTGGTTCCTGTGGTTACATCGCCCCAGAATATGCC
TACACACTTCGTGTGAACGAGAAGAGCGACATATACAGTTTCGGAGTAGT
CATTCTTGAGTTAGTAACTGGAAGACTGCCAGTCGATCCGGAGTTTGGGG
AGAAGGATTTGGTCAAATGGGTCTGCTCTACTTTGGATCAGAAAGGAGTG
GACCATGTTCTTGATCCCAAACTCGATTGCTGTTTTAAGGAAGAAATATG
CAAGGGCCTCAACATTGGCCTACTCTGCACT
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