CF504225

Overview
NameCF504225
Unique NameCF504225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length381
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: IMK3_ARATH (Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana GN=IMK3 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.424e-11
Identity = 39/115 (33.91%), Postives = 68/115 (59.13%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKL---DCCFKEEICKGLNIGLLC 378
            A+++D+G+++++ A+    S+   AG+ GY APE +   + N K+D+YS GV+ILEL+TG+ P +   G  DL +WV + + ++  + V D +L        +EI   L + L C
Sbjct:  626 AKISDYGLSRLMTAAAG-SSVIATAGALGYRAPELSKLKKANTKTDVYSLGVIILELLTGKSPSEALNG-VDLPQWVATAVKEEWTNEVFDLELLNDVNTMGDEILNTLKLALHC 738          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.778e-11
Identity = 30/94 (31.91%), Postives = 57/94 (60.64%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKL 324
            A++ADFG+++      +    + + G+ GY+ PEY  T R+ EKSD+YSFG+V+LE++T +  ++     + + + V + L +  +  ++DP L
Sbjct:  712 AKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQPVLEQANENRHIAERVRTMLTRSDISTIVDPNL 805          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.778e-11
Identity = 41/114 (35.96%), Postives = 64/114 (56.14%), Query Frame = 1
Query:   49 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK--DLVKWVCSTLDQKGVDHVLDPKLDCC--FKEEICKGLNIGLLC 378
            V+D+G+ ++   S  P  ++      GY APE   T +V  KSD+YSFGV++LEL+TG+ P     GE+  DL +WV S + ++    V D +L      +EE+ + L I + C
Sbjct:  491 VSDYGLNQLFSNSSPPNRLA------GYHAPEVLETRKVTFKSDVYSFGVLLLELLTGKSPNQASLGEEGIDLPRWVLSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMAC 598          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.546e-11
Identity = 39/115 (33.91%), Postives = 65/115 (56.52%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD--LVKWVCSTLDQKGVDHVLDPKLDCCF-KEEICKGLNIGLLCT 381
            +++DFG+AK+ D        + IAG+ GY+APEYA    + +K+D+YSFG+V LE+V GR             L+ WV    ++  +  ++DP+L   + +EE    + I ++CT
Sbjct:  765 KISDFGLAKL-DEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCT 878          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.855e-11
Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMS-VIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGR----LPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKL 324
            +V+DFG+++V   S     +S V+ G+ GY+ PEY     + EKSD+YSFGVV+LE++  R      V PE  + DL++WV S   +  VD ++D  L
Sbjct:  661 KVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCCRPIRMQSVPPE--QADLIRWVKSNYRRGTVDQIIDSDL 756          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.855e-11
Identity = 44/120 (36.67%), Postives = 68/120 (56.67%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD---LVKWVCSTLDQKG----VDHVLDPKLDCCFKEEICKGLNIGLLCT 381
            A V DFG+AK++D      + +V  G+ G+IAPEY  T + +EK+D++ FGV+ILEL+TG   +D   G+     ++ WV +   +K     VD  L  + D    EE+   + + LLCT
Sbjct:  440 AIVGDFGLAKLLDQRDSHVTTAV-RGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEV---VELALLCT 555          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.855e-11
Identity = 35/96 (36.46%), Postives = 59/96 (61.46%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK--DLVKWVCSTLDQKGVDHVLDPKL 324
            A+VADFG++K V A G+    + + GS GY+ PEY    ++ +KSD+YSFGVV+LE +  R  ++P+   +  +L +W      +  ++ ++DP L
Sbjct:  664 AKVADFGLSKDV-AFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMQWKRKGLLEKIIDPHL 758          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.855e-11
Identity = 40/119 (33.61%), Postives = 72/119 (60.50%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK-----DLVKWVCSTLDQKGVDHVLDPKLDCCF-KEEICKGLNIGLLCT 381
            A V DFG+AK+++      + +V  G+ G+IAPEY  T + +EK+D++ FG+++LEL+TG   +  EFG+       +++WV     +  V+ ++D +L   + + E+ + L + LLCT
Sbjct:  436 AVVGDFGLAKLLNHEDSHVTTAV-RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRAL--EFGKSVSQKGAMLEWVRKLHKEMKVEELVDRELGTTYDRIEVGEMLQVALLCT 551          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.855e-11
Identity = 35/96 (36.46%), Postives = 59/96 (61.46%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK--DLVKWVCSTLDQKGVDHVLDPKL 324
            A+VADFG++K V A G+    + + GS GY+ PEY    ++ +KSD+YSFGVV+LE +  R  ++P+   +  +L +W      +  ++ ++DP L
Sbjct:  663 AKVADFGLSKDV-AFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMLWKQKGLLEKIIDPHL 757          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.855e-11
Identity = 32/96 (33.33%), Postives = 55/96 (57.29%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEF--GEKDLVKWVCSTLDQKGVDHVLDPKL 324
            A+++DFG++K   +       + + GS GY+ PEY    ++ EKSD+YSFGVV+ E V  R  ++P     + +L +W  S   Q+ ++ ++D  L
Sbjct:  658 AKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWALSWQKQRNLESIIDSNL 753          
The following BLAST results are available for this feature:
BLAST of CF504225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
IMK3_ARATH4.424e-1133.91Probable leucine-rich repeat receptor-like protein... [more]
Y5169_ARATH5.778e-1131.91Probable LRR receptor-like serine/threonine-protei... [more]
Y2267_ARATH5.778e-1135.96Probable inactive receptor kinase At2g26730 OS=Ara... [more]
Y1534_ARATH7.546e-1133.91Probable LRR receptor-like serine/threonine-protei... [more]
Y5900_ARATH9.855e-1139.80Putative receptor-like protein kinase At5g39000 OS... [more]
Y5457_ARATH9.855e-1136.67Probable LRR receptor-like serine/threonine-protei... [more]
Y4391_ARATH9.855e-1136.46Probable receptor-like protein kinase At4g39110 OS... [more]
Y2239_ARATH9.855e-1133.61Probable LRR receptor-like serine/threonine-protei... [more]
Y2214_ARATH9.855e-1136.46Probable receptor-like protein kinase At2g21480 OS... [more]
Y1357_ARATH9.855e-1133.33Probable receptor-like protein kinase At1g30570 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-714 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504225 ID=CF504225; Name=CF504225; organism=Citrus sinensis; type=EST; length=381bp
GAGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTGGTGCACGAGT
GGCCGATTTTGGTGTAGCCAAGGTGGTTGATGCCTCTGGAAAGCCTAAAT
CAATGTCTGTCATTGCTGGTTCCTGTGGTTACATCGCCCCAGAATATGCC
TACACACTTCGTGTGAACGAGAAGAGCGACATATACAGTTTCGGAGTAGT
CATTCTTGAGTTAGTAACTGGAAGACTGCCAGTCGATCCGGAGTTTGGGG
AGAAGGATTTGGTCAAATGGGTCTGCTCTACTTTGGATCAGAAAGGAGTG
GACCATGTTCTTGATCCCAAACTCGATTGCTGTTTTAAGGAAGAAATATG
CAAGGGCCTCAACATTGGCCTACTCTGCACT
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