CF504225

Overview
NameCF504225
Unique NameCF504225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length381
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 4.275e-14
Identity = 37/95 (38.95%), Postives = 61/95 (64.21%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLD 327
            A++ADFG+++     G+   M+V+AG+ GY+ PEY  T  ++EKSD+YSFGVV+LE+VT +  ++       + +WV   L    +  ++DPKL+
Sbjct:  708 AKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVMNKNRERPHINEWVMFMLTNGDIKSIVDPKLN 802          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.583e-14
Identity = 45/114 (39.47%), Postives = 68/114 (59.65%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE--KDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKGLNIGLLCT 381
            +++DFG+AK+ D   K    + +AG+ GY+APEYA    + EK+D+Y+FGVV LELV+GR   D    E  K L++W  +  ++     ++D KL     EE  + + I LLCT
Sbjct:  833 QISDFGLAKLYDDK-KTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKKYLLEWAWNLHEKSRDIELIDDKLTDFNMEEAKRMIGIALLCT 945          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.583e-14
Identity = 38/95 (40.00%), Postives = 60/95 (63.16%), Query Frame = 1
Query:   40 GARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKL 324
            GA++ADFG+++     G+    +V+AG+ GY+ PEY  T  ++EKSD+YSFGVV+LE+VT +  +D       +  WV   L +  +  ++DPKL
Sbjct:  721 GAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVIDKTRERPHINDWVGFMLTKGDIKSIVDPKL 815          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.583e-14
Identity = 41/118 (34.75%), Postives = 74/118 (62.71%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEF----GEKDLVKWVCSTLDQKGVDHVLDPKL-DCCFKEEICKGLNIGLLCT 381
            A ++DFG+A+++  S +  + + +AG+ GY+APEYA T RV++K+D+YS+GVV+LEL++ +  +DP F       ++V+W C  L Q          L D    +++ + L++ ++CT
Sbjct: 1010 AYLSDFGLARLLGTS-ETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFVSYGNGFNIVQWACMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCT 1126          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.292e-14
Identity = 47/116 (40.52%), Postives = 70/116 (60.34%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVD--PEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCF-KEEICKGLNIGLLCT 381
            A+++DFG+AK+ D      S   IAG+ GY+APEYA    + +K+D+YSFGVV LE+V+G+   +  P+     L+ W     +Q  +  ++DP L   F K+E  + LNI LLCT
Sbjct:  809 AKISDFGLAKLNDDENTHISTR-IAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCT 923          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.292e-14
Identity = 37/113 (32.74%), Postives = 66/113 (58.41%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKE-EICKGLNIGLLC 378
            A++ADFG+++      +    +++AG+ GY+  EY  T R++EKSD+YSFGVV+LE++T +  +D       + +WV   L +  + +++DPKL   +      K L + + C
Sbjct:  706 AKLADFGLSRSFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNKPVIDHNRDMPHIAEWVKLMLTRGDISNIMDPKLQGVYDSGSAWKALELAMTC 818          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.292e-14
Identity = 47/123 (38.21%), Postives = 68/123 (55.28%), Query Frame = 1
Query:   49 VADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK-DLVKWVCSTLDQKG----------VDHVL-DPKLDCCFKEEICKGLNIGLLCT 381
            + DFG+A+++D S    S + + G+ GYIAPE A+      +SD+YS+GVV+LELVT +  VD  F E  D+V WV S L              VD +L D  LD   +E++ +   + L CT
Sbjct:  970 IGDFGLARLLDDS--TVSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRKRAVDKSFPESTDIVSWVRSALSSSNNNVEDMVTTIVDPILVDELLDSSLREQVMQVTELALSCT 1090          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.292e-14
Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEF--GEKDLVKWVCSTL-DQKGVDHVLDPKL 324
            +++DFG+AK+     K    + + G+ GY APEYA T ++  KSD+YSFGVV LEL+TGR  +D E   GE++LV W      D++    + DP+L
Sbjct:  228 KLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRL 323          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.523e-14
Identity = 40/96 (41.67%), Postives = 57/96 (59.38%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEF--GEKDLVKWVCSTLDQKGVDHVLDPKL 324
            A++ADF ++            + + G+ GY APEYA T ++N KSD+YSFGVV+LEL+TGR PVD     G++ LV W    L +  V   +D +L
Sbjct:  217 AKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLSEDKVKQCVDARL 312          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.523e-14
Identity = 46/120 (38.33%), Postives = 71/120 (59.17%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK--DLVKWVCSTLDQKGVDHVLDPKL-----DCCFKEEICKGLNIGLLCT 381
            ARV+DFG+A++V AS    + +      GY APE     RV++K+D+YSFGVV+LEL+TG+ P +    E+  DL +WV S   ++  + V D +L         +EE+ + L +G+ CT
Sbjct:  504 ARVSDFGLAQLVSASSTTPNRAT-----GYRAPEVTDPRRVSQKADVYSFGVVLLELLTGKAPSNSVMNEEGMDLARWVHSVAREEWRNEVFDSELMSIETVVSVEEEMAEMLQLGIDCT 618          
The following BLAST results are available for this feature:
BLAST of CF504225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
Y5189_ARATH4.275e-1438.95Probable LRR receptor-like protein kinase At1g5189... [more]
Y1561_ARATH5.583e-1439.47Probable LRR receptor-like serine/threonine-protei... [more]
Y1518_ARATH5.583e-1440.00Probable LRR receptor-like serine/threonine-protei... [more]
RPK2_ARATH5.583e-1434.75LRR receptor-like serine/threonine-protein kinase ... [more]
Y5343_ARATH7.292e-1440.52Probable LRR receptor-like serine/threonine-protei... [more]
Y1756_ARATH7.292e-1432.74Probable LRR receptor-like serine/threonine-protei... [more]
PEPR1_ARATH7.292e-1438.21Leucine-rich repeat receptor-like protein kinase P... [more]
PBS1_ARATH7.292e-1442.71Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
Y2706_ARATH9.523e-1441.67Probable receptor-like protein kinase At2g47060 OS... [more]
RLK90_ARATH9.523e-1438.33Probable inactive receptor kinase RLK902 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-714 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504225 ID=CF504225; Name=CF504225; organism=Citrus sinensis; type=EST; length=381bp
GAGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTGGTGCACGAGT
GGCCGATTTTGGTGTAGCCAAGGTGGTTGATGCCTCTGGAAAGCCTAAAT
CAATGTCTGTCATTGCTGGTTCCTGTGGTTACATCGCCCCAGAATATGCC
TACACACTTCGTGTGAACGAGAAGAGCGACATATACAGTTTCGGAGTAGT
CATTCTTGAGTTAGTAACTGGAAGACTGCCAGTCGATCCGGAGTTTGGGG
AGAAGGATTTGGTCAAATGGGTCTGCTCTACTTTGGATCAGAAAGGAGTG
GACCATGTTCTTGATCCCAAACTCGATTGCTGTTTTAAGGAAGAAATATG
CAAGGGCCTCAACATTGGCCTACTCTGCACT
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