CF504225

Overview
NameCF504225
Unique NameCF504225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length381
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 9.523e-14
Identity = 43/115 (37.39%), Postives = 65/115 (56.52%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEF--GEKDLVKWVCSTLDQKGVDHVLDPKLDCCF-KEEICKGLNIGLLC 378
            A++ADF ++            + + G+ GY APEYA T +++ KSD+YSFGVV+LEL+TGR PVD     G++ LV W    L +  V   +D +L+  +  + I K   +  LC
Sbjct:  212 AKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVKQCVDARLNTDYPPKAIAKMAAVAALC 326          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.244e-13
Identity = 46/116 (39.66%), Postives = 70/116 (60.34%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVD--PEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCF-KEEICKGLNIGLLCT 381
            A+++DFG+AK+ D        + IAG+ GY+APEYA    + +K+D+YSFGVV LE+V+G+   +  P+     L+ W     +Q  +  ++DP L   F K+E  + LNI LLCT
Sbjct:  807 AKISDFGLAKL-DEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCT 921          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.244e-13
Identity = 45/118 (38.14%), Postives = 71/118 (60.17%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCS------TLDQKGVDHVLDPKLDCCFKEEICKGLNIGLLC 378
            A+++DFG AK++       + S +AG+ GY+APE+AYT++V EK D+YSFGV+ILEL+ G+ P        DLV  + S      +L     + VL+P+     +E++ K + + LLC
Sbjct:  995 AKISDFGTAKLLKTDSS--NWSAVAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELIIGKHP-------GDLVSSLSSSPGEALSLRSISDERVLEPRGQ--NREKLLKMVEMALLC 1101          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.244e-13
Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKE--EICKGLNIGLLCT 381
            AR+ DFG+AK +  S K  + + + G+ GYI PEYA T R+ EKSD+YS+G+V+LEL+T R  VD    E +L   + S      V  + DP +    K+   + K   + LLCT
Sbjct:  787 ARLTDFGIAKSLCVS-KSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRKAVD---DESNLHHLIMSKTGNNEVMEMADPDITSTCKDLGVVKKVFQLALLCT 897          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.244e-13
Identity = 44/118 (37.29%), Postives = 72/118 (61.02%), Query Frame = 1
Query:   46 RVADFGVAKVVDA--SGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGR-----LPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKEEICKGLNIGLLC 378
            ++ADFG+AK+ D   +   +  S IAG+ GY+APEYA   + + K+D++SFGV+++E++TG+        D E  E +L+ WV     +  +  V+DP L    + EI + ++IGLLC
Sbjct:  501 KIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIITGKGNNNGRSNDDEEAE-NLLSWVWRCWREDIILSVIDPSLTTGSRSEILRCIHIGLLC 617          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.624e-13
Identity = 42/118 (35.59%), Postives = 68/118 (57.63%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK--DLVKWVCSTLDQKGVDHVLDPKL---DCCFKEEICKGLNIGLLCT 381
            A+V+D+ +A ++  +  P  +       GY APE     ++++K+D+YSFGV+ILEL+TG+ P   +  E+  DL +WV S  +Q+    V DP+L        E + + LNIG+ CT
Sbjct:  482 AKVSDYCLAPMISPTSTPNRID------GYRAPEVTDARKISQKADVYSFGVLILELLTGKSPTHQQLHEEGVDLPRWVSSITEQQSPSDVFDPELTRYQSDSNENMIRLLNIGISCT 593          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.624e-13
Identity = 42/118 (35.59%), Postives = 70/118 (59.32%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD----LVKWVCSTLDQKGVDHVLDPKL-DCCFKEEICKGLNIGLLCT 381
            A ++DFG++K++  S    +  V AG+ GY+APEYA T RV+EK+D+YS+G+V+LEL++ +  +DP F   +    +V W    L Q     V    L +    +++ + L++ L CT
Sbjct:  399 AYLSDFGLSKLLGTSQSHVTTGV-AGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGLWETGPPDDLVEVLHLALKCT 515          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.122e-13
Identity = 45/121 (37.19%), Postives = 71/121 (58.68%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIA---GSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKL-----DCCFKEEICKGLNIGLLCT 381
            A ++DFG+ ++   S  P   +V A   G+ GY++PE   +  +  +SDIYSFG+V+LE++TG+ PV     ++D+VKWV   L +  V  +L+P L     +    EE   G+ +GLLCT
Sbjct:  980 AHISDFGLDRLTIRS--PSRSAVTANTIGTLGYVSPEATLSGEITRESDIYSFGIVLLEILTGKRPV-MFTQDEDIVKWVKKQLQRGQVTELLEPGLLELDPESSEWEEFLLGIKVGLLCT 1097          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.122e-13
Identity = 45/117 (38.46%), Postives = 67/117 (57.26%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKW----VCSTLDQKGVDHVLDPKLDCCFKEEICKGLNIGLLCT 381
            ARV DFG+A++++  G     +VIAG+ GY+APEY  T +   + D+YS+GV+ +EL TGR  VD   GE+ LV+W    +   +  KG    L         E++ + L IG+ CT
Sbjct:  955 ARVTDFGLARLLNV-GDSHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGRRAVDG--GEECLVEWARRVMTGNMTAKGSPITLSGTKPGNGAEQMTELLKIGVKCT 1068          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.771e-13
Identity = 36/113 (31.86%), Postives = 67/113 (59.29%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFKE-EICKGLNIGLLC 378
            A++ADFG+++     G+    +V+AG+ GY+ PEY  T  + EKSD+YSFG+++LE++T R  +D    +  + +WV   L +  +  ++DP L+  +    + K + + + C
Sbjct:  717 AKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQSREKPHIGEWVGVMLTKGDIQSIMDPSLNEDYDSGSVWKAVELAMSC 829          
The following BLAST results are available for this feature:
BLAST of CF504225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
PTI1_SOLLC9.523e-1437.39Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y5344_ARATH1.244e-1339.66Probable LRR receptor-like serine/threonine-protei... [more]
Y1571_ARATH1.244e-1338.14Probable leucine-rich repeat receptor-like protein... [more]
ERECT_ARATH1.244e-1340.00LRR receptor-like serine/threonine-protein kinase ... [more]
CRK28_ARATH1.244e-1337.29Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
Y5659_ARATH1.624e-1335.59Probable inactive receptor kinase At5g16590 OS=Ara... [more]
RPK1_ARATH1.624e-1335.59Probable LRR receptor-like serine/threonine-protei... [more]
Y4361_ARATH2.122e-1337.19Probable LRR receptor-like serine/threonine-protei... [more]
Y1743_ARATH2.122e-1338.46Probable LRR receptor-like serine/threonine-protei... [more]
Y5182_ARATH2.771e-1331.86Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-714 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504225 ID=CF504225; Name=CF504225; organism=Citrus sinensis; type=EST; length=381bp
GAGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTGGTGCACGAGT
GGCCGATTTTGGTGTAGCCAAGGTGGTTGATGCCTCTGGAAAGCCTAAAT
CAATGTCTGTCATTGCTGGTTCCTGTGGTTACATCGCCCCAGAATATGCC
TACACACTTCGTGTGAACGAGAAGAGCGACATATACAGTTTCGGAGTAGT
CATTCTTGAGTTAGTAACTGGAAGACTGCCAGTCGATCCGGAGTTTGGGG
AGAAGGATTTGGTCAAATGGGTCTGCTCTACTTTGGATCAGAAAGGAGTG
GACCATGTTCTTGATCCCAAACTCGATTGCTGTTTTAAGGAAGAAATATG
CAAGGGCCTCAACATTGGCCTACTCTGCACT
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