CF504225

Overview
NameCF504225
Unique NameCF504225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length381
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.771e-13
Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 1
Query:   43 ARVADFGVAKVVDA-SGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKL 324
            ARVADFG++ +  A SG P S  + AG+ GY+ PEY     +  KSD+YSFGVV+LE+++GR  +D +F E ++V+W    +    +  +LDP L
Sbjct:  648 ARVADFGLSILGPADSGTPLS-ELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDMQFEEGNIVEWAVPLIKAGDIFAILDPVL 741          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.771e-13
Identity = 46/116 (39.66%), Postives = 68/116 (58.62%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEF--GEKDLVKWVCSTL-DQKGVDHVLDPKL-DCCFKEEICKGLNIGLLC 378
            A+++DFG+AK      K    + I G+ GY APEY  T  +  KSD+YS+GVV+LE+++GR  VD     GE+ LV+W    L +++ +  V+D +L D    EE CK   + L C
Sbjct:  218 AKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRC 333          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 3.619e-13
Identity = 50/120 (41.67%), Postives = 70/120 (58.33%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSM--SVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCS-----TLDQKGV-DHVLDPKLDCCFKEEICKGLNIGLLC 378
            A+++DFG AK++    KP S   S +AG+ GY+APE AY ++V EK D+YSFGV+ LE++ G  P        DLV  + S     TL  K + DH L P+     KEE+ + L + LLC
Sbjct:  919 AKISDFGTAKLL----KPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKGEHP-------GDLVSTLSSSPPDATLSLKSISDHRL-PEPTPEIKEEVLEILKVALLC 1026          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.619e-13
Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVD---PEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCF-KEEICKGLNIGLLC 378
            A+VADFG +K     G       + G+ GY+ PEY  T +++EKSD++SFGVV+LE+V+GR P++   P   E  LV+W    +    VD ++DP +   +  E + + + + L C
Sbjct:  736 AKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRI-EWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQC 850          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.726e-13
Identity = 46/118 (38.98%), Postives = 69/118 (58.47%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRV--NEKSDIYSFGVVILELVTGRLPVDPEF-GEKD--LVKWVCSTLDQKGVDHVLDPKL-DCCFKEEICKGLNIGLLCT 381
            R++DFG+AKV    G      +I GS GY+ PE+          KSD+Y FGVV+ EL+TG+ P++ ++  EKD  LV WV S + +      +DPK+ +   +E++ + L IG LCT
Sbjct:  713 RLSDFGLAKVF---GNGLDDEIIHGSPGYLPPEFLQPEHELPTPKSDVYCFGVVLFELMTGKKPIEDDYLDEKDTNLVSWVRSLVRKNQASKAIDPKIQETGSEEQMEEALKIGYLCT 827          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.726e-13
Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVD---PEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCF-KEEICKGLNIGLLC 378
            A+VADFG +K     G       + G+ GY+ PEY  T +++EKSD++SFGVV+LE+V+GR P++   P   E  LV+W    +    VD ++DP +   +  E + + + + L C
Sbjct:  735 AKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRV-EWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQC 849          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.726e-13
Identity = 42/116 (36.21%), Postives = 69/116 (59.48%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE----KDLVKWVCSTLDQKGVDHVLDPKL-DCCFKEEICKGLNIGLLC 378
            ++ADFG+A++        + S I G+ GY+APEYA   + + KSD+YSFGV++LE+++GR   +  FGE    +DL+         K    ++DP + + C   E+ + ++IGLLC
Sbjct:  491 KIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGR--KNSSFGESDGAQDLLTHAWRLWTNKKALDLVDPLIAENCQNSEVVRCIHIGLLC 604          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.726e-13
Identity = 42/112 (37.50%), Postives = 68/112 (60.71%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCF-KEEICKGLNIGLLC 378
            ++ADFG+ + +  + K ++ + IAG+ GY+APEY    ++ EK+D+Y+FGV+I+E+VTG+       G   ++  V        +D  +DP+L   F +EE  K L IGLLC
Sbjct:  458 KIADFGLIRSM-GTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVWEHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLC 568          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.173e-13
Identity = 36/96 (37.50%), Postives = 59/96 (61.46%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK--DLVKWVCSTLDQKGVDHVLDPKL 324
            A+VADFG++K      +    + + GS GY+ PEY    ++ EKSD+YSFGVV+LE+V GR  +DP    +  +L++W    + +  ++ ++DP L
Sbjct:  626 AKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDPSLPREKVNLIEWAMKLVKKGKLEDIIDPFL 721          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.173e-13
Identity = 39/96 (40.62%), Postives = 61/96 (63.54%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDP--EFGEKDLVKWVCSTLDQKGVDHVLDPKL 324
            A+VADFG++K+ +      S++ I G+ GY+ PEY  T ++ EKSD+Y+FGVV+LE++  R  +DP     E +L +WV     +  +D +LDP L
Sbjct:  627 AKVADFGLSKIHNQDESNISIN-IKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFARPAIDPYLPHEEVNLSEWVMFCKSKGTIDEILDPSL 721          
The following BLAST results are available for this feature:
BLAST of CF504225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
CRI4_MAIZE2.771e-1343.16Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
APK1B_ARATH2.771e-1339.66Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y4885_ARATH3.619e-1341.67Probable LRR receptor-like serine/threonine-protei... [more]
NORK_MEDTR3.619e-1336.21Nodulation receptor kinase OS=Medicago truncatula ... [more]
Y2242_ARATH4.726e-1338.98Probable LRR receptor-like serine/threonine-protei... [more]
NORK_PEA4.726e-1336.21Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
CRK6_ARATH4.726e-1336.21Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
CRK1_ARATH4.726e-1337.50Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
Y2393_ARATH6.173e-1337.50Probable receptor-like protein kinase At2g39360 OS... [more]
Y2232_ARATH6.173e-1340.63Probable receptor-like protein kinase At2g23200 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-714 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504225 ID=CF504225; Name=CF504225; organism=Citrus sinensis; type=EST; length=381bp
GAGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTGGTGCACGAGT
GGCCGATTTTGGTGTAGCCAAGGTGGTTGATGCCTCTGGAAAGCCTAAAT
CAATGTCTGTCATTGCTGGTTCCTGTGGTTACATCGCCCCAGAATATGCC
TACACACTTCGTGTGAACGAGAAGAGCGACATATACAGTTTCGGAGTAGT
CATTCTTGAGTTAGTAACTGGAAGACTGCCAGTCGATCCGGAGTTTGGGG
AGAAGGATTTGGTCAAATGGGTCTGCTCTACTTTGGATCAGAAAGGAGTG
GACCATGTTCTTGATCCCAAACTCGATTGCTGTTTTAAGGAAGAAATATG
CAAGGGCCTCAACATTGGCCTACTCTGCACT
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