CF504225

Overview
NameCF504225
Unique NameCF504225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length381
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 6.173e-13
Identity = 40/114 (35.09%), Postives = 67/114 (58.77%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGR--LPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKL-DCCFKEEICKGLNIGLLC 378
            ++ADFG+A++        + S I G+ GY+APEYA   + + KSD+YSFGV++LE+++GR     D   G +DL+         +    ++DP + + C   E+ + ++IGLLC
Sbjct:  493 KIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRKNSSFDESDGAQDLLTHTWRLWTNRTALDLVDPLIANNCQNSEVVRCIHIGLLC 606          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.062e-13
Identity = 33/93 (35.48%), Postives = 57/93 (61.29%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKL 324
            ++ADFG+++     G+    +V+AG+ GY+ PEY  T  + EKSD+YSFGVV+L ++T +  +D    ++ + +WV   L +  +  + DP L
Sbjct:  717 KLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVIDQNREKRHIAEWVGGMLTKGDIKSITDPNL 809          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.053e-12
Identity = 44/116 (37.93%), Postives = 69/116 (59.48%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVD--PEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCF-KEEICKGLNIGLLCT 381
            A+++DFG+AK+ D  G     + IAG+ GY+APEYA    + EK+D+YSFGVV LE+V+G+   +  P      L+ W     ++  +  ++DP L   + +EE    LN+ L+CT
Sbjct:  819 AKISDFGLAKLND-DGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFRPTEDFVYLLDWAYVLQERGSLLELVDPTLASDYSEEEAMLMLNVALMCT 933          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.053e-12
Identity = 42/118 (35.59%), Postives = 72/118 (61.02%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD----LVKWVCSTLDQKGVDHVLDPKLDCCFKE-EICKGLNIGLLCT 381
            A V DFG+AK++D      + +V  G+ G+IAPEY  T + +EK+D++ +G+++LEL+TG+   D      D    L+ WV   L +K ++ ++DP L   ++E E+ + + + LLCT
Sbjct:  443 AVVGDFGLAKLMDYKDTHVTTAV-RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCT 559          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.053e-12
Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD--LVKWVCSTL-DQKGVDHVLDPKL 324
            +++DFG+AKV  +  K    + + G+ GY AP+YA T ++  KSDIYSFGVV+LEL+TGR  +D     KD  LV W      D++    ++DP L
Sbjct:  245 KLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLL 340          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.053e-12
Identity = 43/115 (37.39%), Postives = 62/115 (53.91%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVD--PEFGEKDLVKWVCSTLDQKGVDHVLDPKL-DCCFKEEICKGLNIGLLC 378
            A +ADFG+A+++       +  ++ G+ GYI PEY        K D+YSFGVV+LEL+TGR P+D     G +DL+ WV     +K    + DP + D    EE+   L I   C
Sbjct:  883 AHLADFGLARLILPYDTHVTTDLV-GTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEKRESEIFDPFIYDKDHAEEMLLVLEIACRC 996          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.375e-12
Identity = 47/115 (40.87%), Postives = 72/115 (62.61%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDP--EFGEKDLVKWVCSTLDQKGVD-HVLDPKLDCCFKEEICKGLNIGLLCT 381
            +V+DFG+AK+ D   K    + +AG+ GY+APEYA    + EK+D+Y+FGVV LELV+GR   D   E  ++ L++W  + L +KG +  ++D +L     EE  + + I LLCT
Sbjct:  832 KVSDFGLAKLYDDK-KTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKRYLLEWAWN-LHEKGREVELIDHQLTEFNMEEGKRMIGIALLCT 944          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.375e-12
Identity = 46/118 (38.98%), Postives = 69/118 (58.47%), Query Frame = 1
Query:   46 RVADFGVAKVVDAS-GKPKSMSVIAGSCGYIAPEY-AYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLV---KWVCSTLDQKGVDHVLDPKLDCCFKE-EICKGLNIGLLCT 381
            +++DFG+++++    G   + +    + GY+APE     LRVNEK D+Y FGV+ILELVTGR PV  E+GE   V     V   L+Q  V   +DP ++  + E E+   L + L+CT
Sbjct:  869 KISDFGLSRLLTTQDGNTMNNNRFQNALGYVAPELECQNLRVNEKCDVYGFGVLILELVTGRRPV--EYGEDSFVILSDHVRVMLEQGNVLECIDPVMEEQYSEDEVLPVLKLALVCT 984          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.375e-12
Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFG--EKDLVKWVCSTL-DQKGVDHVLDPKL 324
            A+++DFG+AK           + + G+ GY APEY  T R+  KSD+YSFGVV+LEL++GR  +D   G  E  LV W    L D++ +  ++D KL
Sbjct:  233 AKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKL 329          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.796e-12
Identity = 33/94 (35.11%), Postives = 58/94 (61.70%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKL 324
            A++ADFG+++      +    +V+AG+ GY+ PEY  T  + EKSDIYSFG+V+LE+++ R  +     +  +V+WV   + +  +  ++DP L
Sbjct:  716 AKLADFGLSRSFPIGNEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNRPIIQQSREKPHIVEWVSFMITKGDLRSIMDPNL 809          
The following BLAST results are available for this feature:
BLAST of CF504225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
CRK8_ARATH6.173e-1335.09Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
Y5181_ARATH8.062e-1335.48Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH1.053e-1237.93Probable LRR receptor-like serine/threonine-protei... [more]
SERK1_ARATH1.053e-1235.59Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
RLCK7_ARATH1.053e-1242.71Probable serine/threonine-protein kinase RLCKVII O... [more]
PSKR1_DAUCA1.053e-1237.39Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
Y5614_ARATH1.375e-1240.87Probable LRR receptor-like serine/threonine-protei... [more]
Y3804_ARATH1.375e-1238.98Probably inactive leucine-rich repeat receptor-lik... [more]
APK2A_ARATH1.375e-1241.24Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y2899_ARATH1.796e-1235.11Probable leucine-rich repeat receptor-like protein... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-714 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504225 ID=CF504225; Name=CF504225; organism=Citrus sinensis; type=EST; length=381bp
GAGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTGGTGCACGAGT
GGCCGATTTTGGTGTAGCCAAGGTGGTTGATGCCTCTGGAAAGCCTAAAT
CAATGTCTGTCATTGCTGGTTCCTGTGGTTACATCGCCCCAGAATATGCC
TACACACTTCGTGTGAACGAGAAGAGCGACATATACAGTTTCGGAGTAGT
CATTCTTGAGTTAGTAACTGGAAGACTGCCAGTCGATCCGGAGTTTGGGG
AGAAGGATTTGGTCAAATGGGTCTGCTCTACTTTGGATCAGAAAGGAGTG
GACCATGTTCTTGATCCCAAACTCGATTGCTGTTTTAAGGAAGAAATATG
CAAGGGCCTCAACATTGGCCTACTCTGCACT
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