CF504225

Overview
NameCF504225
Unique NameCF504225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length381
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.796e-12
Identity = 34/94 (36.17%), Postives = 60/94 (63.83%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKL 324
            A++ADFG+++     G     +V+AG+ GY+ PEY  T  ++ KSD+YSFGVV+LE+++G+  +D      ++V+W    L+   ++ ++DP L
Sbjct:  698 AKIADFGLSRSF-LIGNEAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLSRENCNIVEWTSFILENGDIESIVDPNL 790          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.796e-12
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD--LVKW 270
            A+VADFG+ ++    GK    + IAG+ GY+APEYA T RV  K D+YSFGV+++EL+TGR  +D    E+   LV W
Sbjct:  731 AKVADFGLVRLAP-EGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLDESQPEESIHLVSW 807          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.796e-12
Identity = 45/118 (38.14%), Postives = 67/118 (56.78%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK----DLVKWVCSTLDQKG-VDHVLDPKLDCCFKEEICKGLNIGLLCT 381
            A++ADFG+++     G  +  +V+AGS GY+ PEY  T ++NEKSD+YS GVV+LE++TG+  +     EK    D V+ + +  D +G VD  L  + D        K   I L CT
Sbjct:  711 AKMADFGLSRSFSVEGSGQISTVVAGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVITGQPAIASSKTEKVHISDHVRSILANGDIRGIVDQRLRERYDV---GSAWKMSEIALACT 825          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.796e-12
Identity = 40/117 (34.19%), Postives = 70/117 (59.83%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD-----LVKWVCSTLDQKGVDHVLDPKLDCCF-KEEICKGLNIGLLC 378
            ++ADFG+A++        +   + G+ GY++PEY    + + KSD+YSFGV+ILE+++G+   +  F + D     LV +V    + K +  +LDP ++  F  EE+ + ++IGLLC
Sbjct:  479 KIADFGMARIFGVDQTVANTGRVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGK--KNSSFYQMDGLVNNLVTYVWKLWENKSLHELLDPFINQDFTSEEVIRYIHIGLLC 593          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.346e-12
Identity = 45/116 (38.79%), Postives = 65/116 (56.03%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD---LVKWVCSTLDQKGVDHVLDPKLDCCF-KEEICKGLNIGLLC 378
            A+V+DFG++K    +      +V+ G+ GY+ PEY  TL++ EKSD+YSFGVV+LEL+ GR P+    G  D   LV W    L Q G   ++D  L   F    + K  +I + C
Sbjct:  746 AKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLS-HSGSPDSFNLVLWARPNL-QAGAFEIVDDILKETFDPASMKKAASIAIRC 859          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.001e-12
Identity = 32/65 (49.23%), Postives = 47/65 (72.31%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVD 237
            A+VADFG++K+V    K    + + G+ GY+ PEY  T ++ EKSD+Y FGVV+LEL+TG+ P+D
Sbjct:  772 AKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPID 836          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.001e-12
Identity = 40/99 (40.40%), Postives = 62/99 (62.63%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMS-VIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGR----LPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKL 324
            A+V+DFG+++V   S     +S V+ G+ GY+ PEY     + EKSD+YSFGVV+LE++  R      V PE  + DL++WV S  +++ VD ++D  L
Sbjct:  667 AKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVLCCRPIRMQSVPPE--QADLIRWVKSNFNKRTVDQIIDSDL 763          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.001e-12
Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVI----AGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD--LVKWVCSTLDQKGVDHVLDPKL 324
            A+V+DFG++++VD +    + S I     G+ GY+ PEY    ++ +KSD+YSFGVV+LE+VT +  +D    E+D  LV ++   +DQ+ +   +DP L
Sbjct:  504 AKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTECIDPLL 603          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.001e-12
Identity = 41/118 (34.75%), Postives = 71/118 (60.17%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD----LVKWVCSTLDQKGVDHVLDPKLDCCFKE-EICKGLNIGLLCT 381
            A V DFG+A+++D      + +V  G+ G+IAPEY  T + +EK+D++ +G+++LEL+TG+   D      D    L+ WV   L +K ++ ++DP L   + E E+ + + + LLCT
Sbjct:  446 AVVGDFGLARLMDYKDTHVTTAV-RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCT 562          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 4.001e-12
Identity = 38/117 (32.48%), Postives = 71/117 (60.68%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD-----LVKWVCSTLDQKGVDHVLDPKL-DCCFKEEICKGLNIGLLC 378
            ++ADFG+A++        + + + G+ GY++PEY    + + KSD+YSFGV+ILE+++G+   +  F + D     LV +V    + K +  ++DP + + C  +E+ + ++IGLLC
Sbjct:  499 KIADFGMARIFGVDQTVANTARVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGK--KNSSFYQMDGLVNNLVTYVWKLWENKTMHELIDPFIKEDCKSDEVIRYVHIGLLC 613          
The following BLAST results are available for this feature:
BLAST of CF504225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
Y1755_ARATH1.796e-1236.17Probable LRR receptor-like serine/threonine-protei... [more]
TMK1_ARATH1.796e-1248.72Probable receptor protein kinase TMK1 OS=Arabidops... [more]
SIRK_ARATH1.796e-1238.14Senescence-induced receptor-like serine/threonine-... [more]
CRK18_ARATH1.796e-1234.19Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
Y5487_ARATH2.346e-1238.79Probable LRR receptor-like serine/threonine-protei... [more]
Y5977_ARATH4.001e-1249.23Probable leucine-rich repeat receptor-like protein... [more]
Y5389_ARATH4.001e-1240.40Probable receptor-like protein kinase At5g38990 OS... [more]
WAKLQ_ARATH4.001e-1238.00Wall-associated receptor kinase-like 20 OS=Arabido... [more]
SERK2_ARATH4.001e-1234.75Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
CRK17_ARATH4.001e-1232.48Cysteine-rich receptor-like protein kinase 17 OS=A... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-714 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504225 ID=CF504225; Name=CF504225; organism=Citrus sinensis; type=EST; length=381bp
GAGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTGGTGCACGAGT
GGCCGATTTTGGTGTAGCCAAGGTGGTTGATGCCTCTGGAAAGCCTAAAT
CAATGTCTGTCATTGCTGGTTCCTGTGGTTACATCGCCCCAGAATATGCC
TACACACTTCGTGTGAACGAGAAGAGCGACATATACAGTTTCGGAGTAGT
CATTCTTGAGTTAGTAACTGGAAGACTGCCAGTCGATCCGGAGTTTGGGG
AGAAGGATTTGGTCAAATGGGTCTGCTCTACTTTGGATCAGAAAGGAGTG
GACCATGTTCTTGATCCCAAACTCGATTGCTGTTTTAAGGAAGAAATATG
CAAGGGCCTCAACATTGGCCTACTCTGCACT
back to top