CF504225

Overview
NameCF504225
Unique NameCF504225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length381
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 4.001e-12
Identity = 38/114 (33.33%), Postives = 67/114 (58.77%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVD--PEFGEKDLVKWVCSTLDQKGVDHVLDPKL-DCCFKEEICKGLNIGLLC 378
            ++ADFG+A++       ++ S I G+ GY++PEYA   + + KSD+YSFGV++LE+++G+         G  DLV +            ++DP + + C + E+ + ++IGLLC
Sbjct:  477 KIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYAWGLWSNGRPLELVDPAIVENCQRNEVVRCVHIGLLC 590          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.001e-12
Identity = 40/97 (41.24%), Postives = 61/97 (62.89%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVD-PEFG-EKDLVKWVCSTL-DQKGVDHVLDPKL 324
            ++++DFG+AK      K    + + G+ GY APEY  T R+  KSD+YSFGVV+LEL++GR  VD  + G E+ LV W    L D++ +  ++D +L
Sbjct:  230 SKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRL 326          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.001e-12
Identity = 34/94 (36.17%), Postives = 56/94 (59.57%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKL 324
            ARVADFG++ +           + AG+ GY+ PEY     +  KSD+YSFGV++LE+++GR  +D  + E ++V+W    +    ++ +LDP L
Sbjct:  655 ARVADFGLSLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMHYEEGNIVEWAVPLIKAGDINALLDPVL 748          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.226e-12
Identity = 42/116 (36.21%), Postives = 68/116 (58.62%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE----KDLVKWVCSTLDQKGVDHVLDPKL-DCCFKEEICKGLNIGLLC 378
            ++ADFG+A++       ++ S I G+ GY++PEYA   + + KSD+YSFGV++LE+++GR   +  F E    +DLV              ++DP + D C K E+ +  +IGLLC
Sbjct:  476 KIADFGMARIFGMDQTQQNTSRIVGTYGYMSPEYAMRGQFSMKSDVYSFGVLVLEIISGR--KNNSFIETDDAQDLVTHAWRLWRNGTALDLVDPFIADSCRKSEVVRCTHIGLLC 589          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 5.226e-12
Identity = 43/118 (36.44%), Postives = 71/118 (60.17%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKD----LVKWVCSTLDQKGVDHVLDPKLDCCFK-EEICKGLNIGLLCT 381
            A V DFG+AK++D      + +V  G+ G+IAPEY  T + +EK+D++ +GV++LEL+TG+   D      D    L+ WV   L +K ++ ++D  L   +K EE+ + + + LLCT
Sbjct:  430 AVVGDFGLAKLMDYKDTHVTTAV-RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCT 546          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.825e-12
Identity = 34/96 (35.42%), Postives = 56/96 (58.33%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEK--DLVKWVCSTLDQKGVDHVLDPKL 324
            A+VADFG++K      +    + + GS GY+ PEY    ++ EKSD+YSFGVV+ E++  R  +DP    +  +L +W      +  ++H++DP L
Sbjct:  620 AKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLAEWAMKWQKKGQLEHIIDPSL 715          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.825e-12
Identity = 40/112 (35.71%), Postives = 65/112 (58.04%), Query Frame = 1
Query:   46 RVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCFK-EEICKGLNIGLLC 378
            R+ DFG+A++ +  G   + +V+ G+ GY+APE A   + +  SD+++FGV++LE+V+GR P D   G   L  WV     +  + H +DP+L   +   E    L +GLLC
Sbjct:  505 RLGDFGLARLYER-GSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTDS--GTFFLADWVMELHARGEILHAVDPRLGFGYDGVEARLALVVGLLC 613          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.825e-12
Identity = 42/122 (34.43%), Postives = 65/122 (53.28%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGE--KDLVKWVCSTLDQKGVDHVLDPKLDC-------CFKEEICKGLNIGLLCT 381
            A++ADFG+A+      K    + IAG+ GY+APEY    ++ E  D+YSFGV++LE+VTG+     +  +    L+           ++ + DP LD          K+EI + + IGLLCT
Sbjct:  464 AKIADFGLARSFQ-DDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLITEAWKHFQSGELEKIYDPNLDWKSQYDSHIIKKEIARVVQIGLLCT 584          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.914e-12
Identity = 34/113 (30.09%), Postives = 64/113 (56.64%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPEFGEKDLVKWVCSTLDQKGVDHVLDPKLDCCF-KEEICKGLNIGLLC 378
            A++ DFG+++      +    + +AGS GY+ PEY  T  + EKSD++SFGVV+LE++T +  +D    +  + +WV   L    + +++DP ++  +    + K L + + C
Sbjct:  730 AKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTREKSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSC 842          
BLAST of CF504225 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.914e-12
Identity = 39/94 (41.49%), Postives = 61/94 (64.89%), Query Frame = 1
Query:   43 ARVADFGVAKVVDASGKPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPVDPE-FG-EKDLVKWVCSTLDQKGVDHVLDP 318
            A+V+DFG+++  +      S SV  G+ GY+ PEY  + ++ EKSD+YSFGVV+ EL++G+ PV  E FG E ++V W  S + +  V  ++DP
Sbjct:  745 AKVSDFGLSRQTEEDLTHVS-SVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGDVCGIIDP 837          
The following BLAST results are available for this feature:
BLAST of CF504225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
CRK10_ARATH4.001e-1233.33Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
APK2B_ARATH4.001e-1241.24Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
ACR4_ARATH4.001e-1236.17Serine/threonine-protein kinase-like protein ACR4 ... [more]
CRK7_ARATH5.226e-1236.21Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
BAK1_ARATH5.226e-1236.44BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
Y5597_ARATH6.825e-1235.42Probable receptor-like protein kinase At5g59700 OS... [more]
LRKA2_ARATH6.825e-1235.71Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CRK2_ARATH6.825e-1234.43Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
Y4245_ARATH8.914e-1230.09Probable LRR receptor-like serine/threonine-protei... [more]
Y1677_ARATH8.914e-1241.49Probable LRR receptor-like serine/threonine-protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-714 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504225 ID=CF504225; Name=CF504225; organism=Citrus sinensis; type=EST; length=381bp
GAGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTGGTGCACGAGT
GGCCGATTTTGGTGTAGCCAAGGTGGTTGATGCCTCTGGAAAGCCTAAAT
CAATGTCTGTCATTGCTGGTTCCTGTGGTTACATCGCCCCAGAATATGCC
TACACACTTCGTGTGAACGAGAAGAGCGACATATACAGTTTCGGAGTAGT
CATTCTTGAGTTAGTAACTGGAAGACTGCCAGTCGATCCGGAGTTTGGGG
AGAAGGATTTGGTCAAATGGGTCTGCTCTACTTTGGATCAGAAAGGAGTG
GACCATGTTCTTGATCCCAAACTCGATTGCTGTTTTAAGGAAGAAATATG
CAAGGGCCTCAACATTGGCCTACTCTGCACT
back to top