CF504233

Overview
NameCF504233
Unique NameCF504233
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length490
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6949 contig Csv1_Contig6949:49..538. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.964e-12
Identity = 35/71 (49.30%), Postives = 48/71 (67.61%), Query Frame = 1 
Query:  274 VESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLT 486
            V+SP+V Y+   I + Y+Y TT +  E   G  +  V+P+  ++ F+T   VP+LGVMLVGWGGNNGSTLT
Sbjct:    9 VDSPDVVYSPETIEARYEYRTTRVSREG--GVLR--VQPRATRFTFRTARQVPRLGVMLVGWGGNNGSTLT 75
[Close]
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_MACFA (Inositol-3-phosphate synthase 1 OS=Macaca fascicularis GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.964e-12
Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 1 
Query:  268 FKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLT 486
            F VESP+V Y    I + Y+Y TT +  E   G  +  V P + ++ F+T   VP+LGVMLVGWGGNNGSTLT
Sbjct:    7 FFVESPDVVYGPEAIEAQYEYRTTRVSREG--GVLK--VHPTSTRFTFRTARQVPRLGVMLVGWGGNNGSTLT 75
[Close]
BLAST of CF504233 vs. ExPASy Swiss-Prot
Match: INO1_HUMAN (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.964e-12
Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 1 
Query:  268 FKVESPNVKYTDHEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLT 486
            F VESP+V Y    I + Y+Y TT +  E   G  +  V P + ++ F+T   VP+LGVMLVGWGGNNGSTLT
Sbjct:    7 FFVESPDVVYGPEAIEAQYEYRTTRVSREG--GVLK--VHPTSTRFTFRTARQVPRLGVMLVGWGGNNGSTLT 75
The following BLAST results are available for this feature:
BLAST of CF504233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
INO1_MOUSE7.964e-1249.30Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]
INO1_MACFA7.964e-1250.68Inositol-3-phosphate synthase 1 OS=Macaca fascicul... [more]
INO1_HUMAN7.964e-1250.68Inositol-3-phosphate synthase 1 OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-722 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-15_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504233 ID=CF504233; Name=CF504233; organism=Citrus sinensis; type=EST; length=490bp
CTAGTTTCGAAAGTTAAAAGAGTGTTGAGTCGAGTGGGAAGTGAGAATTG
AGAAGGAGAGTTGAGTTCGGAGACAGCAAGACGAAACAGCTCTTCTTCCA
ATAAATCTCAAAAGCATTTGTTTGGTTTTATTTAAAGCAATTTTCTCAGC
AAACTCTTCTTCTAATAAATTTTAAAGCATTTGTTTGGTTTTTATTTAAA
GCAATTTTCTCAGCGAAGTTTTCAATTTTTTCTCTAAAATTTTCCTGGGA
AAATGTTTATCGAAAATTTCAAGGTTGAGAGCCCAAATGTGAAGTACACA
GATCATGAGATTCACTCTGTGTACGATTATGAAACCACTGAGCTTGTTCA
TGAGAACAGAAATGGCACTTATCAGTGGATTGTCAAGCCCAAAACTGTCA
AATATGAGTTCAAAACCGATGTTCATGTCCCTAAACTTGGGGTTATGCTT
GTGGGTTGGGGTGGAAACAACGGCTCAACTCTCACGGGTG
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