CF504247
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504247 vs. ExPASy Swiss-Prot
Match: SYLC_HUMAN (Leucyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=LARS PE=1 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 8.500e-44 Identity = 85/153 (55.56%), Postives = 115/153 (75.16%), Query Frame = 1 Query: 1 TFCIYNHTAIMSQRH--WPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDTANTGILRLTKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHYKNYMFREALKTGFYDLQAARDEY 453 ++ +YNH A+ ++ WP R NGH++LNSEKMSKSTGNF TL QAI++FSAD R +LADAGD V+DANFV A+ GILRL + W++E++A SLR+GP ST+ DRVF +E+N + TDQ+Y+ MF+EALKTGF++ QAA+D+Y Sbjct: 683 SYYLYNHVAMWPEQSDKWPTAVRANGHLLLNSEKMSKSTGNFLTLTQAIDKFSADGMRLALADAGDTVEDANFVEAMADAGILRLYTWVEWVKEMVANWDSLRSGPASTFNDRVFASELNAGIIKTDQNYEKMMFKEALKTGFFEFQAAKDKY 835
BLAST of CF504247 vs. ExPASy Swiss-Prot
Match: SYLC_MOUSE (Leucyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Lars PE=2 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 1.450e-43 Identity = 85/153 (55.56%), Postives = 115/153 (75.16%), Query Frame = 1 Query: 1 TFCIYNHTAIMSQRH--WPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDTANTGILRLTKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHYKNYMFREALKTGFYDLQAARDEY 453 ++ IYNH A+ ++ WP R NGH++LNSEKMSKSTGNF TL QA+++FSAD R +LADAGD V+DANFV A+ GILRL + W++E+LA SSLR+GP ++ DRVF +E+N + TDQ+Y+ MF+EALKTGF++ QAA+D+Y Sbjct: 685 SYYIYNHVAMWPEQSDKWPVSVRANGHLLLNSEKMSKSTGNFLTLSQAVDKFSADGMRLALADAGDTVEDANFVEAMADAGILRLYTWVEWVKEMLASCSSLRSGPADSFNDRVFASEMNAGIIKTDQNYEKMMFKEALKTGFFEFQAAKDKY 837
BLAST of CF504247 vs. ExPASy Swiss-Prot
Match: SYLC_PONAB (Leucyl-tRNA synthetase, cytoplasmic OS=Pongo abelii GN=LARS PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.894e-43 Identity = 84/153 (54.90%), Postives = 115/153 (75.16%), Query Frame = 1 Query: 1 TFCIYNHTAIMSQRH--WPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDTANTGILRLTKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHYKNYMFREALKTGFYDLQAARDEY 453 ++ +YNH A+ ++ WP R NGH++LNSEKMSKSTGNF TL QAI++FSAD R +LADAGD V+DANFV A+ GILRL + W++E++A SLR+GP +T+ DRVF +E+N + TDQ+Y+ MF+EALKTGF++ QAA+D+Y Sbjct: 683 SYYLYNHVAMWPEQSDKWPTAVRANGHLLLNSEKMSKSTGNFLTLTQAIDKFSADGMRLALADAGDTVEDANFVEAMADAGILRLYTWVEWVKEMVANWDSLRSGPANTFNDRVFASELNAGIIKTDQNYEKMMFKEALKTGFFEFQAAKDKY 835
BLAST of CF504247 vs. ExPASy Swiss-Prot
Match: SYLC_SCHPO (Putative leucyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=SPAC26F1.13c PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 2.094e-42 Identity = 83/151 (54.97%), Postives = 110/151 (72.85%), Query Frame = 1 Query: 1 TFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDTANTGILRLTKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHYKNYMFREALKTGFYDLQAARDEY 453 TFC+Y HTAI +++WP+G R NGH+++N EKMSKSTGNF TL +A ++F ADATR +LADAGD VDDANF AN+ ILRL + AW +E++ +LRTG P + D+VFENEIN +E + + + +F+ ALK+ FYDLQ ARD Y Sbjct: 706 TFCLYTHTAIFDEKYWPKGIRANGHLLMNGEKMSKSTGNFMTLHEATKKFGADATRLALADAGDTVDDANFEEALANSAILRLYTQEAWCKEMMENLDNLRTG-PYNFHDKVFENEINQLIESSREAFSATLFKAALKSCFYDLQNARDWY 855
BLAST of CF504247 vs. ExPASy Swiss-Prot
Match: SYLC_CAEEL (Leucyl-tRNA synthetase OS=Caenorhabditis elegans GN=lrs-1 PE=2 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 3.696e-39 Identity = 79/154 (51.30%), Postives = 109/154 (70.78%), Query Frame = 1 Query: 1 TFCIYNHTAIM--SQRHWPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDTANTGILRLTKEIAWMEEVLAV-ESSLRTGPPSTYADRVFENEINIAVEMTDQHYKNYMFREALKTGFYDLQAARDEY 453 T+ ++NH AI WP+G R NGH++LN+EKMSKSTGNF TL++AIE+FSAD R SLADAGDG++DANFV+ A+ ILRL I W++E++ ++ L +ADRVF NE+N + T+Q+Y+ F++ALKTGF++ QA RD Y Sbjct: 685 TYLLFNHAAIWPTDTSKWPKGIRANGHLLLNNEKMSKSTGNFMTLEEAIEKFSADGMRLSLADAGDGLEDANFVYAMADAAILRLFTMIEWIKEMIEQRDAGLLRKDAKKFADRVFANEMNSLIAATEQNYEATNFKDALKTGFFEYQAIRDTY 838
BLAST of CF504247 vs. ExPASy Swiss-Prot
Match: SYLC_YEAST (Leucyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=CDC60 PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 5.337e-38 Identity = 78/151 (51.66%), Postives = 100/151 (66.23%), Query Frame = 1 Query: 1 TFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDTANTGILRLTKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHYKNYMFREALKTGFYDLQAARDEY 453 TF IY H A+ ++ WP+G R NGH+MLN+ KMSKSTGNF TL+Q +E+F ADA R + ADAGD V+DANF AN ILRL W EE+ ES+LRTG + + D FE+E+N +E T + Y ++ ALK G +D QAARD Y Sbjct: 698 TFFIYTHVALFPKKFWPKGIRANGHLMLNNSKMSKSTGNFMTLEQTVEKFGADAARIAFADAGDTVEDANFDESNANAAILRLFNLKEWAEEI-TKESNLRTGEITDFFDIAFEHEMNALIEKTYEQYALTNYKNALKYGLFDFQAARDYY 847
BLAST of CF504247 vs. ExPASy Swiss-Prot
Match: SYLC_NEUCR (Leucyl-tRNA synthetase, cytoplasmic OS=Neurospora crassa GN=leu-6 PE=3 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 2.242e-36 Identity = 72/151 (47.68%), Postives = 98/151 (64.90%), Query Frame = 1 Query: 1 TFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDTANTGILRLTKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHYKNYMFREALKTGFYDLQAARDEY 453 TF +YNH A+ + +WP+ R NGH+ LN EKMSKSTGNF TL ++++ ADA R +LADAGDG+ D+NFV D A+ ILR W+EE L + SLRTG +++ D +F+NE+N V +HY+ ++ ALK YD ARD Y Sbjct: 726 TFWLYNHIALFPREYWPKSVRANGHLQLNGEKMSKSTGNFMTLDDVVKKYGADAARVALADAGDGISDSNFVEDVADNTILRFYTNKEWIEETLK-DESLRTGELNSFQDALFDNEMNALVNEARKHYEETSYKLALKAAHYDFLNARDMY 875
BLAST of CF504247 vs. ExPASy Swiss-Prot
Match: SYLC_DICDI (Leucyl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=leuS PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 5.522e-35 Identity = 72/151 (47.68%), Postives = 98/151 (64.90%), Query Frame = 1 Query: 1 TFCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDTANTGILRLTKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHYKNYMFREALKTGFYDLQAARDEY 453 TF +Y H AI ++ P+ R NG + LN EKMSKSTGNF TL ++ +FSAD TR +LADAGD ++DANFV TA T +L+L +I W++E L R+GP D +FE+EIN + +++ Y+ FR+AL F+DLQ ARD Y Sbjct: 680 TFFLYTHAAIFEKKFQPKSIRANGFVNLNGEKMSKSTGNFLTLVDSVAKFSADGTRVALADAGDSIEDANFVDQTAVTSLLKLHTQIQWVQETLDSIDKFRSGPLDRIQDTIFESEINNIIVESEKAYQKTNFRDALHLVFFDLQNARDHY 830
BLAST of CF504247 vs. ExPASy Swiss-Prot
Match: SYLC_ENCCU (Probable leucyl-tRNA synthetase, cytoplasmic OS=Encephalitozoon cuniculi GN=ECU06_0280 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 8.837e-25 Identity = 55/157 (35.03%), Postives = 93/157 (59.24%), Query Frame = 1 Query: 4 FCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDTANTGILRLTKEIAWMEEVLAVES-------SLRTGPPSTYADRVFENEINIAVEMTDQHYKNYMFREALKTGFYDLQAARDEY 453 F ++NH A+ ++HWP+ NGH+MLNSEKMSKS+GN+ T+ +++++F +TR LA GDG +DANFV AN +L+L + +EE+ S ++ +ADR I++ V + +++ +R+ +K GFY++ A++ Y Sbjct: 514 FFLFNHVALFEEKHWPKRMFTNGHLMLNSEKMSKSSGNYMTVDESLDKFGVSSTRMCLAVCGDGNEDANFVESNANAFVLKLYSYVKMIEELCTGRSLNPCILDLMKGYGEMGFADRFLMQTISMNVAHATRAHEDMTYRDVVKYGFYEMVHAKEMY 670
BLAST of CF504247 vs. ExPASy Swiss-Prot
Match: SYLC_NOSCE (Probable leucyl-tRNA synthetase, cytoplasmic OS=Nosema ceranae (strain BRL01) GN=NCER_100842 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.661e-21 Identity = 53/146 (36.30%), Postives = 84/146 (57.53%), Query Frame = 1 Query: 4 FCIYNHTAIMSQRHWPRGFRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSADATRFSLADAGDGVDDANFVFDTANTGILRL---TKEIAWMEEVLAVESSLRTGPPSTYADRVFENEINIAVEMTDQHYKNYMFREALKTGFYDL 432 F ++NH A+ +++WP+ NGH+MLN EKMSKSTGNF ++ A+ ++ ATR LA GD DDANFV D AN IL++ KEI + E++ +S T + AD + +++ V Y + + + +K F+++ Sbjct: 536 FFMFNHVALFDEKYWPKRIFTNGHLMLNKEKMSKSTGNFLSVDDALLKYGKSATRMCLAVCGDTNDDANFVEDNANLFILKIYTFVKEIQKLNELVRKKSENETIASYSNADVLLLETVSVNVTEALNAYNSMKYSDVVKFSFFEM 681 The following BLAST results are available for this feature:
BLAST of CF504247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504247 ID=CF504247; Name=CF504247; organism=Citrus sinensis; type=EST; length=453bpback to top |