CF504255

Overview
NameCF504255
Unique NameCF504255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length362
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12387 contig Csv1_Contig12387:192..553. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLC5_ARATH (Probable xyloglucan glycosyltransferase 5 OS=Arabidopsis thaliana GN=CSLC5 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.726e-45
Identity = 83/120 (69.17%), Postives = 94/120 (78.33%), Query Frame = 1
Query:    1 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVT 360
            CE+PESYEAY+KQQHRWHSGPMQLFRLCL  I+ +KI++                    YSFTLFCIILP+TMF+PEAELP WV+CYIP  MSFLN+LP+PKSFPFIVPYLLFENTMSVT
Sbjct:  443 CEVPESYEAYKKQQHRWHSGPMQLFRLCLGSILTSKIAIWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPVWVICYIPVFMSFLNLLPSPKSFPFIVPYLLFENTMSVT 562          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLC8_ARATH (Probable xyloglucan glycosyltransferase 8 OS=Arabidopsis thaliana GN=CSLC8 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 4.650e-45
Identity = 83/120 (69.17%), Postives = 93/120 (77.50%), Query Frame = 1
Query:    1 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVT 360
            CE+PESYEAY+KQQHRWHSGPMQLFRLCL  I+ +KI+M                    YSFTLFC+ILP+TMF+PEAELP WV+CY+P  MS LNILPAPKSFPFIVPYLLFENTMSVT
Sbjct:  443 CEVPESYEAYKKQQHRWHSGPMQLFRLCLRSILTSKIAMWKKANLILLFFLLRKLILPFYSFTLFCVILPITMFVPEAELPIWVICYVPIFMSLLNILPAPKSFPFIVPYLLFENTMSVT 562          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLC6_ARATH (Probable xyloglucan glycosyltransferase 6 OS=Arabidopsis thaliana GN=CSLC6 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.767e-44
Identity = 82/120 (68.33%), Postives = 92/120 (76.67%), Query Frame = 1
Query:    1 CELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVT 360
            CELPESYEAY+KQQ+RWHSGPMQLFRLC  DI+R+K+S                     YSFTLFC+ILP+TMF PEA LP+WVVCYIP  MS LNI+PAP+SFPFIVPYLLFENTMSVT
Sbjct:  437 CELPESYEAYKKQQYRWHSGPMQLFRLCFFDILRSKVSAAKKANMIFLFFLLRKLILPFYSFTLFCVILPLTMFFPEANLPSWVVCYIPGIMSILNIIPAPRSFPFIVPYLLFENTMSVT 556          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLAE_ARATH (Probable mannan synthase 14 OS=Arabidopsis thaliana GN=CSLA14 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.988e-21
Identity = 47/119 (39.50%), Postives = 69/119 (57.98%), Query Frame = 1
Query:    4 ELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAK-ISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSV 357
            ELP S++AYR QQHRW  GP  LF+    +II+ + +S+                    ++F  +C+ILP T+  PE E+P W   YIPAT++ LN +  PKSF  I+ ++LFEN M++
Sbjct:  312 ELPSSFQAYRFQQHRWSCGPANLFKKIAMEIIKNQNVSLWKKVYLIYNFFFLRKIVVHIFTFVFYCVILPATVIFPEIEVPKWTTIYIPATITILNAIATPKSFYLILYWILFENVMAM 430          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLAA_ARATH (Probable mannan synthase 10 OS=Arabidopsis thaliana GN=CSLA10 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.275e-18
Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 1
Query:    4 ELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAK-ISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSV 357
            ELP  ++A+R QQHRW  GP  LFR  + +IIR K +++                    ++F  +C+ILP ++F PE  +PAW   YIP+ ++   ++  P+SF  ++ ++LFEN MS+
Sbjct:  339 ELPSKFKAFRFQQHRWSCGPANLFRKMIMEIIRNKRVTIWKKLYLVYSFFFLRKIIVHCFTFIFYCVILPTSVFFPEVNIPAWSTFYIPSMITLCIVIATPRSFYLVIFWILFENVMSM 457          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLA1_ORYSJ (Glucomannan 4-beta-mannosyltransferase 1 OS=Oryza sativa subsp. japonica GN=CSLA1 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.275e-18
Identity = 43/119 (36.13%), Postives = 67/119 (56.30%), Query Frame = 1
Query:    4 ELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIR-AKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSV 357
            ELP +++A+R QQHRW  GP  LFR  L +I+R  K+++                     +F  +C+I+P T+F+PE  +P W   YIP  ++ LN +  P+SF  +  ++LFEN MS+
Sbjct:  301 ELPSTFKAFRFQQHRWSCGPANLFRKMLMEIVRNKKVTIWKKIHVIYNFFLIRKIIAHIVTFAFYCLIIPATIFVPEVRIPKWGCVYIPTIITLLNSVGTPRSFHLLFFWILFENVMSL 419          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLA3_ARATH (Probable mannan synthase 3 OS=Arabidopsis thaliana GN=CSLA3 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.846e-18
Identity = 42/119 (35.29%), Postives = 65/119 (54.62%), Query Frame = 1
Query:    4 ELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIR-AKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSV 357
            ELP +++AYR QQHRW  GP  L+R    +I++  K+S                     ++F  +C+ILP T+  PE ++P W   Y P T++ LN +  P+S   +V ++LFEN MS+
Sbjct:  337 ELPSTFKAYRFQQHRWSCGPANLWRKMTMEILQNKKVSAWKKLYLIYNFFFIRKIVVHIFTFVFYCLILPTTVLFPELQVPKWATVYFPTTITILNAIATPRSLHLLVFWILFENVMSM 455          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLA9_ORYSJ (Probable mannan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLA9 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.141e-17
Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = 1
Query:    4 ELPESYEAYRKQQHRWHSGPMQLFRLCLPDII-RAKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSV 357
            ELP +++A+R QQHRW  GP  LFR  L +I    K+++                     +F  +C+++P T+ IPE E+P W   Y+P+ ++ LN +  P+S   ++ ++LFEN MS+
Sbjct:  309 ELPSTFKAFRYQQHRWSCGPANLFRKMLVEIATNKKVTLWKKIYVIYNFFLVRKIIGHIVTFVFYCLVVPATVLIPEVEIPRWGYVYLPSIVTILNSIGTPRSLHLLIFWVLFENVMSL 427          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLA1_ARATH (Probable mannan synthase 1 OS=Arabidopsis thaliana GN=CSLA1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.141e-17
Identity = 41/119 (34.45%), Postives = 65/119 (54.62%), Query Frame = 1
Query:    4 ELPESYEAYRKQQHRWHSGPMQLFRLCLPDII-RAKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSV 357
            ELP  ++AYR QQHRW  GP  LFR    +II   ++S+                     +F  +CII+P ++F PE  +P+W   Y+P+ +S  + L  P+SF  ++ ++LFEN M++
Sbjct:  341 ELPSKFKAYRFQQHRWSCGPANLFRKMTMEIIFNKRVSIWKKFYVIYSFFFVRKVAVHFLTFFFYCIIVPTSVFFPEIHIPSWSTIYVPSLISIFHTLATPRSFYLVIFWVLFENVMAM 459          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLA9_ARATH (Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis thaliana GN=CSLA9 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.358e-17
Identity = 42/119 (35.29%), Postives = 65/119 (54.62%), Query Frame = 1
Query:    4 ELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAK-ISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSV 357
            ELP +++AYR QQHRW  GP  LFR    +I+  K +++                     +F  +C+ILP T+ +PE  +P W   YIP+ ++ LN +  P+S   +V ++LFEN MS+
Sbjct:  314 ELPSTFKAYRYQQHRWSCGPANLFRKMAFEIMTNKNVTLWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVTVPKWGAVYIPSVITLLNAVGTPRSLHLMVFWILFENVMSL 432          
The following BLAST results are available for this feature:
BLAST of CF504255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CSLC5_ARATH2.726e-4569.17Probable xyloglucan glycosyltransferase 5 OS=Arabi... [more]
CSLC8_ARATH4.650e-4569.17Probable xyloglucan glycosyltransferase 8 OS=Arabi... [more]
CSLC6_ARATH1.767e-4468.33Probable xyloglucan glycosyltransferase 6 OS=Arabi... [more]
CSLAE_ARATH7.988e-2139.50Probable mannan synthase 14 OS=Arabidopsis thalian... [more]
CSLAA_ARATH1.275e-1835.29Probable mannan synthase 10 OS=Arabidopsis thalian... [more]
CSLA1_ORYSJ1.275e-1836.13Glucomannan 4-beta-mannosyltransferase 1 OS=Oryza ... [more]
CSLA3_ARATH4.846e-1835.29Probable mannan synthase 3 OS=Arabidopsis thaliana... [more]
CSLA9_ORYSJ3.141e-1733.61Probable mannan synthase 9 OS=Oryza sativa subsp. ... [more]
CSLA1_ARATH3.141e-1734.45Probable mannan synthase 1 OS=Arabidopsis thaliana... [more]
CSLA9_ARATH5.358e-1735.29Glucomannan 4-beta-mannosyltransferase 9 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-744 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_B12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504255 ID=CF504255; Name=CF504255; organism=Citrus sinensis; type=EST; length=362bp
TGTGAATTGCCAGAATCTTATGAAGCTTATAGGAAACAACAGCACAGATG
GCATTCTGGACCAATGCAGTTGTTTCGCTTGTGCTTGCCTGACATCATAA
GAGCCAAGATAAGCATGGGGAAGAAATTTAATTTGATCTTTCTTTTCTTT
CTGCTCAGAAAACTTATCCTACCATTTTATTCTTTCACCCTCTTTTGTAT
AATTCTTCCCATGACAATGTTTATCCCAGAGGCTGAGCTCCCTGCTTGGG
TCGTCTGTTACATACCGGCCACCATGTCATTTCTCAACATTCTCCCTGCT
CCAAAATCCTTCCCATTTATTGTCCCTTACCTTCTTTTTGAAAACACAAT
GTCAGTGACCAA
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