CF504255

Overview
NameCF504255
Unique NameCF504255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length362
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLA2_ARATH (Glucomannan 4-beta-mannosyltransferase 2 OS=Arabidopsis thaliana GN=CSLA2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.358e-17
Identity = 40/119 (33.61%), Postives = 65/119 (54.62%), Query Frame = 1
Query:    4 ELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIR-AKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSV 357
            ELP ++ A+R QQHRW  GP  LFR  + +I+R  K+                       +F  +C++LP+T+ +PE ++P W   YIP+ ++ LN +  P+S   +  ++LFEN MS+
Sbjct:  314 ELPSTFRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVRFWKKVYVIYSFFFVRKIIAHWVTFCFYCVVLPLTILVPEVKVPIWGSVYIPSIITILNSVGTPRSIHLLFYWILFENVMSL 432          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLAB_ARATH (Probable mannan synthase 11 OS=Arabidopsis thaliana GN=CSLA11 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 6.998e-17
Identity = 40/119 (33.61%), Postives = 63/119 (52.94%), Query Frame = 1
Query:    4 ELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAK-ISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSV 357
            ELP  ++A+R QQHRW  GP  LFR    +IIR K +++                    ++F  +C ILP ++F PE  +P W   Y P  ++  N +  P+SF  ++ ++LFEN M++
Sbjct:  230 ELPSQFKAFRFQQHRWSCGPANLFRKMTMEIIRNKRVTIWKKLYVIYSFFFVRKIIVHFFTFFFYCFILPTSVFFPEVNIPTWSTVYFPFMITLFNAIATPRSFYLVIFWVLFENVMAM 348          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLAB_ORYSJ (Probable mannan synthase 11 OS=Oryza sativa subsp. japonica GN=CSLA11 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.139e-17
Identity = 38/119 (31.93%), Postives = 65/119 (54.62%), Query Frame = 1
Query:    4 ELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIR-AKISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSV 357
            ELP +++AYR QQHRW  GP  LF+  + +I+   K+S                      +F  +C ++P+++++PE E+P W V Y+P  ++    +  P SF  ++ ++LFEN MS+
Sbjct:  335 ELPSTFKAYRFQQHRWSCGPANLFKKMMVEILENKKVSFWNKIHLWYDFFFVGKIAAHTVTFIYYCFVIPVSVWLPEIEIPLWGVVYVPTVITLCKAVGTPSSFHLVILWVLFENVMSL 453          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLAF_ARATH (Probable mannan synthase 15 OS=Arabidopsis thaliana GN=CSLA15 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 3.473e-16
Identity = 37/119 (31.09%), Postives = 65/119 (54.62%), Query Frame = 1
Query:    4 ELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAK-ISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSV 357
            ELP  ++A+R QQHRW  GP  L R    +II  K + +                    +++  +C+ILP ++F+PE  +P W   Y+P+ ++ L+ +  P+SF  ++ ++LFEN M++
Sbjct:  328 ELPSQFKAFRFQQHRWSCGPANLIRKMTMEIIHNKRVKIWKKFYVIYSFFFLRKIVVHFFTYFFYCVILPTSVFLPEVNIPNWSTIYVPSVITLLSAIATPRSFYLVIFWVLFENVMAM 446          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLA1_CYATE (Mannan synthase 1 OS=Cyamopsis tetragonoloba GN=ManS PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.010e-15
Identity = 41/119 (34.45%), Postives = 63/119 (52.94%), Query Frame = 1
Query:    4 ELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAK-ISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSV 357
            ELP +++AYR QQHRW  GP  LF+    +II  K + +                     +F  +CI++P  + +PE  L   +  YIPAT++ LN +  P+S   +V ++LFEN MS+
Sbjct:  308 ELPSTFKAYRFQQHRWSCGPANLFKKMTKEIICCKRVPLLKRLHLIYAFFFVRKIVAHWVTFFFYCIVIPACVIVPEVNLKKQIAIYIPATITILNAVSTPRSMHLLVLWILFENVMSL 426          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLA6_ORYSJ (Probable mannan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLA6 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.940e-15
Identity = 40/119 (33.61%), Postives = 62/119 (52.10%), Query Frame = 1
Query:    4 ELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAK-ISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSV 357
            ELP + +AYR QQHRW  GP  LF+    +I+ AK +S                     ++F  F ++LPM +F PE ++P W +  IP  +  L+ +  P+S   I+ + LFEN M++
Sbjct:  358 ELPSTLKAYRSQQHRWSCGPALLFKKMFWEILAAKKVSFWKKLYMTYDFFIARRIISTFFTFFFFSVLLPMKVFFPEVQIPLWELILIPTAIILLHSVGTPRSIHLIILWFLFENVMAL 476          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLA2_ORYSJ (Probable mannan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLA2 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.550e-15
Identity = 39/119 (32.77%), Postives = 62/119 (52.10%), Query Frame = 1
Query:    4 ELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAK-ISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSV 357
            ELP +++AYR QQHRW  G   LFR    +II  K +SM                     +F  +CI++P++  +PE  +P W + YIP  ++ +N +  P S   +  ++LFEN M++
Sbjct:  360 ELPSTFQAYRHQQHRWTCGAANLFRKMAWEIITNKEVSMWKKYHLLYSFFFVRRAIAPILTFLFYCIVIPLSAMVPEVTIPVWGLVYIPTAITIMNAIRNPGSVHLMPFWILFENVMAM 478          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLA4_ORYSJ (Probable mannan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLA4 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.554e-15
Identity = 36/119 (30.25%), Postives = 63/119 (52.94%), Query Frame = 1
Query:    4 ELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAK-ISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSV 357
            ELP +++AYR QQHRW  G   LFR    +I + K +S+                     +F  +C+++P+++ +PE  +P W + YIP  ++ +N +  P S   +  ++LFEN M++
Sbjct:  329 ELPSTFKAYRHQQHRWTCGAANLFRKMATEIAKNKGVSVWKKLHLLYSFFFVRRVVAPILTFLFYCVVIPLSVMVPEVSIPVWGMVYIPTAITIMNAIRNPGSIHLMPFWILFENVMAM 447          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLA3_ORYSJ (Probable mannan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLA3 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.458e-14
Identity = 39/118 (33.05%), Postives = 58/118 (49.15%), Query Frame = 1
Query:    4 ELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAK-ISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMS 354
            ELP + + YR QQHRW  G   LFR    +I+  K +                        F L+C+++P ++ IPE  +P W V Y+P T++ L+ +    S  FI  ++LFEN MS
Sbjct:  332 ELPSNLKTYRHQQHRWTCGAANLFRKVGAEILFTKEVPFWWKFYLLYSFFFVRKVVAHVVPFMLYCVVIPFSVLIPEVTVPVWGVVYVPTTITLLHAIRNTSSIHFIPFWILFENVMS 449          
BLAST of CF504255 vs. ExPASy Swiss-Prot
Match: CSLA7_ARATH (Probable mannan synthase 7 OS=Arabidopsis thaliana GN=CSLA7 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.613e-13
Identity = 39/119 (32.77%), Postives = 60/119 (50.42%), Query Frame = 1
Query:    4 ELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRAK-ISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSV 357
            ELP S++A R QQHRW  GP  L R     IIR++ +S+                     +F  +C+ILP T+  PE  +P W   Y+P+ ++ L  +   +S   +  ++LFEN MS+
Sbjct:  336 ELPCSFKALRSQQHRWTCGPANLLRKMAGQIIRSENVSLWKKWYMLYSFFFMRKIVAHILTFCFYCVILPATVLFPEVTVPKWAAFYLPSLITLLIAIGRLRSIHLLAFWVLFENAMSL 454          
The following BLAST results are available for this feature:
BLAST of CF504255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CSLA2_ARATH5.358e-1733.61Glucomannan 4-beta-mannosyltransferase 2 OS=Arabid... [more]
CSLAB_ARATH6.998e-1733.61Probable mannan synthase 11 OS=Arabidopsis thalian... [more]
CSLAB_ORYSJ9.139e-1731.93Probable mannan synthase 11 OS=Oryza sativa subsp.... [more]
CSLAF_ARATH3.473e-1631.09Probable mannan synthase 15 OS=Arabidopsis thalian... [more]
CSLA1_CYATE1.010e-1534.45Mannan synthase 1 OS=Cyamopsis tetragonoloba GN=Ma... [more]
CSLA6_ORYSJ2.940e-1533.61Probable mannan synthase 6 OS=Oryza sativa subsp. ... [more]
CSLA2_ORYSJ6.550e-1532.77Probable mannan synthase 2 OS=Oryza sativa subsp. ... [more]
CSLA4_ORYSJ8.554e-1530.25Probable mannan synthase 4 OS=Oryza sativa subsp. ... [more]
CSLA3_ORYSJ9.458e-1433.05Probable mannan synthase 3 OS=Oryza sativa subsp. ... [more]
CSLA7_ARATH1.613e-1332.77Probable mannan synthase 7 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-744 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_B12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504255 ID=CF504255; Name=CF504255; organism=Citrus sinensis; type=EST; length=362bp
TGTGAATTGCCAGAATCTTATGAAGCTTATAGGAAACAACAGCACAGATG
GCATTCTGGACCAATGCAGTTGTTTCGCTTGTGCTTGCCTGACATCATAA
GAGCCAAGATAAGCATGGGGAAGAAATTTAATTTGATCTTTCTTTTCTTT
CTGCTCAGAAAACTTATCCTACCATTTTATTCTTTCACCCTCTTTTGTAT
AATTCTTCCCATGACAATGTTTATCCCAGAGGCTGAGCTCCCTGCTTGGG
TCGTCTGTTACATACCGGCCACCATGTCATTTCTCAACATTCTCCCTGCT
CCAAAATCCTTCCCATTTATTGTCCCTTACCTTCTTTTTGAAAACACAAT
GTCAGTGACCAA
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