CF504257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504257 vs. ExPASy Swiss-Prot
Match: LAX1_ORYSJ (Auxin transporter-like protein 1 OS=Oryza sativa subsp. japonica GN=Os01g0856500 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 5.039e-18 Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 3 Query: 165 ACSSNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSW 281 +C+SNQVAQVLLTLPYSFSQLGMLSG+L QLFYG +GSW Sbjct: 62 SCASNQVAQVLLTLPYSFSQLGMLSGVLLQLFYGFMGSW 100 HSP 2 Score: 36.5798 bits (83), Expect = 5.039e-18 Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 2 Query: 107 KSKLSNFFWHGGSVYDAWFS 166 K + N WHGGSV+DAWFS Sbjct: 43 KFSMKNLLWHGGSVWDAWFS 62
BLAST of CF504257 vs. ExPASy Swiss-Prot
Match: LAX4_MEDTR (Auxin transporter-like protein 4 OS=Medicago truncatula GN=LAX4 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.554e-18 Identity = 33/39 (84.62%), Postives = 39/39 (100.00%), Query Frame = 3 Query: 165 ACSSNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSW 281 +C+SNQVAQVLLTLPYSFSQLGM+SGI+FQ+FYGL+GSW Sbjct: 54 SCASNQVAQVLLTLPYSFSQLGMVSGIVFQIFYGLIGSW 92 HSP 2 Score: 35.039 bits (79), Expect = 6.554e-18 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 122 NFFWHGGSVYDAWFS 166 +F WHGGSV+DAWFS Sbjct: 40 SFLWHGGSVWDAWFS 54
BLAST of CF504257 vs. ExPASy Swiss-Prot
Match: LAX1_ARATH (Auxin transporter-like protein 1 OS=Arabidopsis thaliana GN=LAX1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.108e-17 Identity = 34/39 (87.18%), Postives = 38/39 (97.44%), Query Frame = 3 Query: 165 ACSSNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSW 281 +C+SNQVAQVLLTLPYSFSQLGMLSGIL Q+FYGL+GSW Sbjct: 59 SCASNQVAQVLLTLPYSFSQLGMLSGILLQIFYGLMGSW 97 HSP 2 Score: 34.2686 bits (77), Expect = 1.108e-17 Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 116 LSNFFWHGGSVYDAWFS 166 + +F WHGGS +DAWFS Sbjct: 43 MKSFLWHGGSAWDAWFS 59 The following BLAST results are available for this feature:
BLAST of CF504257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504257 ID=CF504257; Name=CF504257; organism=Citrus sinensis; type=EST; length=283bpback to top |