CF504261

Overview
NameCF504261
Unique NameCF504261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.067e-50
Identity = 83/116 (71.55%), Postives = 91/116 (78.45%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIVMEL+A+  P+TAENFRALCTGEKGVGKSGKPLHYKGS+FHRVIP FMCQ            ESIYG KF DE FV+K   PG+LSMANAGP TNGSQFF+CT  T WLDGKH+
Sbjct:   19 RIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHV 134

HSP 2 Score: 40.4318 bits (93), Expect = 1.067e-50
Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFGQVVEGMDVVKAIEKVG+
Sbjct:  135 VFGQVVEGMDVVKAIEKVGT 154
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: CYP3_CAEEL (Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhabditis elegans GN=cyn-3 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.510e-49
Identity = 83/116 (71.55%), Postives = 92/116 (79.31%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIVMEL+ DV P+TA NFRALCTGE G+GKSGKPLH+KGS FHR+IP FM Q            ESIYG KF DENF +KHTGPG+LSMANAGP TNGSQFF+CT KTEWLDGKH+
Sbjct:   19 RIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHV 134

HSP 2 Score: 33.8834 bits (76), Expect = 1.510e-49
Identity = 15/20 (75.00%), Postives = 18/20 (90.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG+VVEG+DVVKA+E  GS
Sbjct:  135 VFGRVVEGLDVVKAVESNGS 154
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: CYP7_CAEEL (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans GN=cyn-7 PE=1 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 5.683e-49
Identity = 84/116 (72.41%), Postives = 93/116 (80.17%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIVMEL+ D+ P+TAENFRALCTGEKGVGKSGKPLH+KGS FHR+IP FM Q            ESIYG KF DENF +KHTGPG+LSMANAGP TNGSQFF+CT KT WLDGKH+
Sbjct:   19 RIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTAWLDGKHV 134

HSP 2 Score: 30.4166 bits (67), Expect = 5.683e-49
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGSS 413
            VFG+VVEG+D+V  +E  GSS
Sbjct:  135 VFGRVVEGLDIVSKVEGNGSS 155
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: CYP2_CAEEL (Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhabditis elegans GN=cyn-2 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 8.727e-47
Identity = 79/116 (68.10%), Postives = 89/116 (76.72%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIVMEL+ D+ P+TAENFRALCTGEKG GKSGK LH+KGS FHR+IP FM Q            ESI+G KF DENF +KHTGPG+LSMAN G  TNGSQFF+CT KT WLDGKH+
Sbjct:   19 RIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRIIPEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFLCTVKTTWLDGKHV 134

HSP 2 Score: 35.4242 bits (80), Expect = 8.727e-47
Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG+V+EGMDVVKAIE  GS
Sbjct:  135 VFGKVIEGMDVVKAIESKGS 154
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIA_DICDI (Peptidyl-prolyl cis-trans isomerase A OS=Dictyostelium discoideum GN=ppiA PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.607e-45
Identity = 80/116 (68.97%), Postives = 90/116 (77.59%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            ++VMEL+A+  P+TAENFRALCTGEKG+GKSGKPL YKGSSFHRVI  FMCQ            ESIYG+KFADENF  KH G G LSMANAG  TNGSQFF+C A T+WLDGKH+
Sbjct:   27 KVVMELYANTVPKTAENFRALCTGEKGIGKSGKPLSYKGSSFHRVITNFMCQGGDFTMGNGTGGESIYGNKFADENFKLKHFGQGTLSMANAGANTNGSQFFICVAPTDWLDGKHV 142

HSP 2 Score: 30.0314 bits (66), Expect = 1.607e-45
Identity = 14/20 (70.00%), Postives = 15/20 (75.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG V EGMDVVK +E  GS
Sbjct:  143 VFGFVTEGMDVVKKMEAAGS 162
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: CYP1_CAEEL (Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhabditis elegans GN=cyn-1 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.630e-45
Identity = 78/116 (67.24%), Postives = 86/116 (74.14%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+ MELF DV P+TAENFRALCTGEKGVG+ G  LH+KGS FHR+IP FM Q            ESIYG+KF DENF  KHTGPG LSMANAGP TNGSQFF+CT  T WLDG H+
Sbjct:   37 RVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLDGGHV 152

HSP 2 Score: 33.4982 bits (75), Expect = 4.630e-45
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFGQV +GM VVK IEK+GS
Sbjct:  153 VFGQVTDGMSVVKKIEKMGS 172
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana GN=CYP19-4 PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 5.016e-44
Identity = 78/116 (67.24%), Postives = 87/116 (75.00%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+V+ LF    P+TAENFRALCTGEKGVGKSGKPLHYKGS FHR+IP FM Q            ESIYG KFADENF  KHTGPG+LSMAN+G  TNGSQFF+ T  T WLDG+H+
Sbjct:   47 RVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHV 162

HSP 2 Score: 28.1054 bits (61), Expect = 5.016e-44
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVG 407
            VFG+VV+GMDVV  IE  G
Sbjct:  163 VFGKVVQGMDVVYKIEAEG 181
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIA_RAT (Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus GN=Ppia PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 8.547e-44
Identity = 80/116 (68.97%), Postives = 87/116 (75.00%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+  ELFAD  P+TAENFRAL TGEKG G       YKGSSFHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKH+
Sbjct:   19 RVCFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHV 127

HSP 2 Score: 29.261 bits (64), Expect = 8.547e-44
Identity = 12/20 (60.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG+V EGM +V+A+E+ GS
Sbjct:  128 VFGKVKEGMSIVEAMERFGS 147
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIA_MOUSE (Peptidyl-prolyl cis-trans isomerase A OS=Mus musculus GN=Ppia PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.114e-43
Identity = 80/116 (68.97%), Postives = 86/116 (74.14%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+  ELFAD  P+TAENFRAL TGEKG G       YKGSSFHR+IPGFMCQ             SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKH+
Sbjct:   19 RVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHV 127

HSP 2 Score: 29.6462 bits (65), Expect = 1.114e-43
Identity = 12/20 (60.00%), Postives = 18/20 (90.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG+V EGM++V+A+E+ GS
Sbjct:  128 VFGKVKEGMNIVEAMERFGS 147
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIA_CRIGR (Peptidyl-prolyl cis-trans isomerase A OS=Cricetulus griseus GN=PPIA PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.114e-43
Identity = 80/116 (68.97%), Postives = 86/116 (74.14%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+  ELFAD  P+TAENFRAL TGEKG G       YKGSSFHR+IPGFMCQ             SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKH+
Sbjct:   19 RVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHV 127

HSP 2 Score: 29.6462 bits (65), Expect = 1.114e-43
Identity = 12/20 (60.00%), Postives = 18/20 (90.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG+V EGM++V+A+E+ GS
Sbjct:  128 VFGKVKEGMNIVEAMERFGS 147
The following BLAST results are available for this feature:
BLAST of CF504261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 220
Match NameE-valueIdentityDescription
CYPH_MAIZE1.067e-5071.55Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]
CYP3_CAEEL1.510e-4971.55Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhab... [more]
CYP7_CAEEL5.683e-4972.41Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhab... [more]
CYP2_CAEEL8.727e-4768.10Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhab... [more]
PPIA_DICDI1.607e-4568.97Peptidyl-prolyl cis-trans isomerase A OS=Dictyoste... [more]
CYP1_CAEEL4.630e-4567.24Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhab... [more]
CP19D_ARATH5.016e-4467.24Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Ara... [more]
PPIA_RAT8.547e-4468.97Peptidyl-prolyl cis-trans isomerase A OS=Rattus no... [more]
PPIA_MOUSE1.114e-4368.97Peptidyl-prolyl cis-trans isomerase A OS=Mus muscu... [more]
PPIA_CRIGR1.114e-4368.97Peptidyl-prolyl cis-trans isomerase A OS=Cricetulu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-750 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504261 ID=CF504261; Name=CF504261; organism=Citrus sinensis; type=EST; length=413bp
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAG
CCTCTCCACTACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACATTT
GTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAGGCCATCGAGAA
AGTGGGGTCCAGC
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