CF504261

Overview
NameCF504261
Unique NameCF504261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIH_GIBZE (Peptidyl-prolyl cis-trans isomerase H OS=Gibberella zeae GN=CYP3 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.413e-32
Identity = 66/117 (56.41%), Postives = 74/117 (63.25%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSK-FADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI  ELF DV P+TAENFR  CTGE      G+P  YKGS FHR+IP FMCQ              I+G K F DENF  KH  PG+LSMANAGP TNGSQFF+ T  T +LD KH+
Sbjct:   27 RITFELFKDVVPKTAENFRQFCTGESKT-PVGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIWGFKSFEDENFTLKHDQPGLLSMANAGPNTNGSQFFITTVPTPFLDNKHV 142          

HSP 2 Score: 27.7202 bits (60), Expect = 3.413e-32
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIE 398
            VFG+V EGMDVVK +E
Sbjct:  143 VFGKVFEGMDVVKKME 158          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIH_EMENI (Peptidyl-prolyl cis-trans isomerase H OS=Emericella nidulans GN=cyp3 PE=3 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.413e-32
Identity = 65/117 (55.56%), Postives = 79/117 (67.52%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGS-KFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+ +ELFADVTPRTAENFR  CTGE    + G+P  YKGS FHRVI  FM Q             +IYG+ KF+DENF  +H  PG+LSMAN+GP TNG QFF+ T  T +L+GKH+
Sbjct:   31 RLKLELFADVTPRTAENFRQFCTGESK-NQQGRPQGYKGSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFSDENFTLRHDRPGLLSMANSGPNTNGCQFFITTTATPFLNGKHV 146          

HSP 2 Score: 29.261 bits (64), Expect = 3.413e-32
Identity = 11/16 (68.75%), Postives = 15/16 (93.75%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIE 398
            VFGQV++GMD+V+ IE
Sbjct:  147 VFGQVIDGMDIVRMIE 162          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIH_CRYNE (Peptidyl-prolyl cis-trans isomerase H OS=Cryptococcus neoformans GN=CYP3 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.517e-32
Identity = 70/118 (59.32%), Postives = 82/118 (69.49%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHICV 355
            RI MELF D+TP+TAENFR LCTGE  +  +  P  YK ++FHRVIP FM Q             SIYG++F DENF  KHTGPG+LSMAN+GP TNG QFF+ TA  E+LDGKH CV
Sbjct:   28 RIKMELFDDITPKTAENFRQLCTGEHRI--NSVPQGYKKATFHRVIPQFMVQGGDFVRGDGTGSFSIYGAQFEDENFKVKHTGPGLLSMANSGPNTNGCQFFITTAPAEFLDGKH-CV 142          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIB_SCHPO (Peptidyl-prolyl cis-trans isomerase B OS=Schizosaccharomyces pombe GN=cyp4 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.524e-32
Identity = 65/116 (56.03%), Postives = 75/116 (64.66%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+ + LF    P+TAENFRAL TGEKG G       Y+GS FHRVIP FM Q            +SIYGS+F DENF   H  PG+LSMANAGP +NGSQFF+ T KT WLDG H+
Sbjct:   42 RVTIGLFGKTVPKTAENFRALATGEKGFG-------YEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHV 150          

HSP 2 Score: 25.409 bits (54), Expect = 7.524e-32
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEK 401
            VFG+V+ G D+VK I K
Sbjct:  151 VFGEVLSGYDIVKKISK 167          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIB2_RHIOR (Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus oryzae GN=cyp9 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.790e-32
Identity = 63/116 (54.31%), Postives = 75/116 (64.66%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV  L+    P+TAENF+ L TG+ G G       YKGS+FHRVI  FM Q            +SIYGS+F DENF  +HT PG+LSMANAGP +NGSQFF+ T  T WLDGKH+
Sbjct:   49 RIVFGLYGKTVPKTAENFKQLATGQNGYG-------YKGSTFHRVIDQFMIQGGDFTNHDGTGGKSIYGSRFPDENFKLRHTVPGLLSMANAGPDSNGSQFFITTVVTSWLDGKHV 157          

HSP 2 Score: 29.261 bits (64), Expect = 9.790e-32
Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEK 401
            VFG+V+EGMDVV  IEK
Sbjct:  158 VFGKVLEGMDVVTKIEK 174          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.658e-31
Identity = 67/116 (57.76%), Postives = 77/116 (66.38%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIVM L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG+KF DENF  +HT  G+LSMANAG  TNGSQFF+ TA T WLDGKH+
Sbjct:   50 RIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTNGDGTGGKSIYGNKFEDENFKLRHTKKGVLSMANAGKDTNGSQFFITTAITAWLDGKHV 158          

HSP 2 Score: 24.6386 bits (52), Expect = 1.658e-31
Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEKV 404
            VFG+V+EG D+V  I+ V
Sbjct:  159 VFGEVLEGYDIVDKIQVV 176          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.660e-31
Identity = 65/116 (56.03%), Postives = 76/116 (65.52%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV+ L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG KFADENF  +HT  G+LSMANAG  TNGSQFF+ T  T WLDG+H+
Sbjct:   51 RIVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKSFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHV 159          

HSP 2 Score: 26.1794 bits (56), Expect = 1.660e-31
Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEKV 404
            VFG+V+EG +VV+ IE V
Sbjct:  160 VFGEVLEGYEVVEQIENV 177          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIH_MOUSE (Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus GN=Ppih PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.242e-31
Identity = 65/116 (56.03%), Postives = 78/116 (67.24%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+ +ELFADV P+TAENFR  CTGE    K G P+ YKGS+FHRVI  FM Q             SIY   FADENF  +H+ PG+LSMAN+GP TNG QFF+  +K +WLDGKH+
Sbjct:   26 RMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHV 139          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIH_HUMAN (Peptidyl-prolyl cis-trans isomerase H OS=Homo sapiens GN=PPIH PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.242e-31
Identity = 65/116 (56.03%), Postives = 78/116 (67.24%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+ +ELFADV P+TAENFR  CTGE    K G P+ YKGS+FHRVI  FM Q             SIY   FADENF  +H+ PG+LSMAN+GP TNG QFF+  +K +WLDGKH+
Sbjct:   26 RMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHV 139          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIH_BOVIN (Peptidyl-prolyl cis-trans isomerase H OS=Bos taurus GN=PPIH PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.242e-31
Identity = 65/116 (56.03%), Postives = 78/116 (67.24%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+ +ELFADV P+TAENFR  CTGE    K G P+ YKGS+FHRVI  FM Q             SIY   FADENF  +H+ PG+LSMAN+GP TNG QFF+  +K +WLDGKH+
Sbjct:   26 RMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHV 139          
The following BLAST results are available for this feature:
BLAST of CF504261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 220
Match NameE-valueIdentityDescription
PPIH_GIBZE3.413e-3256.41Peptidyl-prolyl cis-trans isomerase H OS=Gibberell... [more]
PPIH_EMENI3.413e-3255.56Peptidyl-prolyl cis-trans isomerase H OS=Emericell... [more]
PPIH_CRYNE4.517e-3259.32Peptidyl-prolyl cis-trans isomerase H OS=Cryptococ... [more]
PPIB_SCHPO7.524e-3256.03Peptidyl-prolyl cis-trans isomerase B OS=Schizosac... [more]
PPIB2_RHIOR9.790e-3254.31Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus... [more]
PPIB_ARTBE1.658e-3157.76Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]
PPIB_ASPFU1.660e-3156.03Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIH_MOUSE2.242e-3156.03Peptidyl-prolyl cis-trans isomerase H OS=Mus muscu... [more]
PPIH_HUMAN2.242e-3156.03Peptidyl-prolyl cis-trans isomerase H OS=Homo sapi... [more]
PPIH_BOVIN2.242e-3156.03Peptidyl-prolyl cis-trans isomerase H OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-750 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504261 ID=CF504261; Name=CF504261; organism=Citrus sinensis; type=EST; length=413bp
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAG
CCTCTCCACTACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACATTT
GTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAGGCCATCGAGAA
AGTGGGGTCCAGC
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