CF504261

Overview
NameCF504261
Unique NameCF504261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIA_STRCH (Peptidyl-prolyl cis-trans isomerase A OS=Streptomyces chrysomallus GN=ppiA PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.519e-31
Identity = 69/116 (59.48%), Postives = 74/116 (63.79%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI   LF DV P+TAENFRAL TGEKG G       Y GSSFHRVI  FM Q            +SIYG KFADENF  KH   G+LSMANAG  TNGSQFF+ T  T WLDGKH+
Sbjct:   18 RITFNLFDDVVPKTAENFRALATGEKGFG-------YAGSSFHRVITDFMLQGGDFTRGDGTGGKSIYGEKFADENFQLKHDRVGLLSMANAGKNTNGSQFFITTVLTPWLDGKHV 126          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIB_MOUSE (Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus GN=Ppib PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 1.372e-30
Identity = 63/116 (54.31%), Postives = 71/116 (61.21%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+V  LF    P+T +NF AL TGEKG G       YK S FHRVI  FM Q            +SIYG +F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKH+
Sbjct:   59 RVVFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHV 167          

HSP 2 Score: 28.1054 bits (61), Expect = 1.372e-30
Identity = 11/16 (68.75%), Postives = 15/16 (93.75%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIE 398
            VFG+V+EGMDVV+ +E
Sbjct:  168 VFGKVLEGMDVVRKVE 183          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIB_BOVIN (Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus GN=PPIB PE=1 SV=4)

HSP 1 Score: 124.02 bits (310), Expect = 1.787e-30
Identity = 63/116 (54.31%), Postives = 72/116 (62.07%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+V+ LF    P+T +NF AL TGEKG G       YK S FHRVI  FM Q            +SIYG +F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKH+
Sbjct:   59 RVVIGLFGKTVPKTVDNFVALATGEKGFG-------YKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHV 167          

HSP 2 Score: 28.1054 bits (61), Expect = 1.787e-30
Identity = 11/16 (68.75%), Postives = 15/16 (93.75%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIE 398
            VFG+V+EGMDVV+ +E
Sbjct:  168 VFGKVLEGMDVVRKVE 183          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPID_CANGA (Peptidyl-prolyl cis-trans isomerase D OS=Candida glabrata GN=CPR6 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.306e-30
Identity = 67/118 (56.78%), Postives = 74/118 (62.71%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGK--PLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV EL+ DV P+TAENF  LC G+ G+ KS    PL YKGS FHRVI  FM Q            ESIYG KF DENF  KH  P +LSMANAGP TNGSQ F+    T  LDGKH+
Sbjct:   19 RIVFELYKDVVPKTAENFLKLCEGKSGMAKSKPDVPLSYKGSIFHRVIKDFMIQFGDFTNFDGTGGESIYGEKFEDENFEIKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHV 136          

HSP 2 Score: 25.0238 bits (53), Expect = 2.306e-30
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEK 401
            VFG+V+EG  +V+ IEK
Sbjct:  137 VFGEVIEGKRLVRLIEK 153          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: CYP1_BRUMA (Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia malayi GN=CYP-1 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.479e-30
Identity = 66/117 (56.41%), Postives = 74/117 (63.25%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGK-SGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIVMEL+ D+ PRT  NF  LCTG  G GK SGKPLHYKGS+FHRVI  FM Q            ESIYG  F DE FV KH  P ++SMAN GP TNGSQFF+ T     L+  H+
Sbjct:   22 RIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHV 138          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 3.945e-30
Identity = 62/116 (53.45%), Postives = 70/116 (60.34%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+   LF    P+T +NF AL TGEKG G       YK S FHRVI  FM Q            +SIYG +F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKH+
Sbjct:   59 RVTFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHV 167          

HSP 2 Score: 28.1054 bits (61), Expect = 3.945e-30
Identity = 11/16 (68.75%), Postives = 15/16 (93.75%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIE 398
            VFG+V+EGMDVV+ +E
Sbjct:  168 VFGKVLEGMDVVRKVE 183          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPID_CRYNE (Peptidyl-prolyl cis-trans isomerase D OS=Cryptococcus neoformans GN=CPR6 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.228e-30
Identity = 66/116 (56.90%), Postives = 75/116 (64.66%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+  ELF DV P+TA NF+ LC G+K   ++G  L Y GSSFHR I GFM Q            ESIYG KF DENF  KH  P +LSMANAGPGTNGSQFF+ T  T  LDGKH+
Sbjct:   19 RLTFELFDDVVPKTANNFKHLCIGDK-TNEAGVKLAYAGSSFHRCIKGFMLQGGDFTRGDGTGGESIYGEKFEDENFELKHDKPMLLSMANAGPGTNGSQFFITTVPTPHLDGKHV 133          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIB_GIBZE (Peptidyl-prolyl cis-trans isomerase B OS=Gibberella zeae GN=CPR2 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 5.141e-30
Identity = 64/116 (55.17%), Postives = 73/116 (62.93%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+VM L+    P T ENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG +F DENF  KHT  G+LSMANAG  TNGSQFF+ T  T WLDGKH+
Sbjct:   50 RVVMGLYGKTVPETTENFRALATGEKGFG-------YEGSAFHRVIKNFMIQGGDFTKGDGTGGKSIYGDRFKDENFKLKHTKKGLLSMANAGRDTNGSQFFITTVVTSWLDGKHV 158          

HSP 2 Score: 23.8682 bits (50), Expect = 5.141e-30
Identity = 8/16 (50.00%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIE 398
            VFG+V+EG ++++ IE
Sbjct:  159 VFGEVLEGYEIIEKIE 174          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIA_SCHMA (Peptidyl-prolyl cis-trans isomerase OS=Schistosoma mansoni PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 5.169e-30
Identity = 64/116 (55.17%), Postives = 71/116 (61.21%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI+ ELF DV P T  NFR LCT +   G       YKGS FHR+IPGFMCQ            +SIYG+KF DENF  KH     LSMANAGP TNGSQFF+ T    WLDGKH+
Sbjct:   18 RIIFELFNDV-PDTTRNFRELCTHKNNFG-------YKGSVFHRIIPGFMCQGGDFTNGDGTGGKSIYGNKFKDENFNHKHEAFS-LSMANAGPNTNGSQFFITTVPCSWLDGKHV 124          

HSP 2 Score: 30.8018 bits (68), Expect = 5.169e-30
Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEKVGSS 413
            VFG+VV G+DVVK +E +GS+
Sbjct:  125 VFGKVVSGIDVVKKMESLGST 145          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPID_USTMA (Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.522e-30
Identity = 64/116 (55.17%), Postives = 75/116 (64.66%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV+EL+AD  PRTAENFR LCT    +  +G+PL ++ S FHRVIP FM Q            ESIYG KF DE+   KH  P +LSMANAG  TNGSQFF+ T  T  LDGKH+
Sbjct:   33 RIVLELYADRVPRTAENFRVLCTNTSKLASTGQPLSFRNSIFHRVIPKFMIQGGDFTRADGTGGESIYGEKFQDEDLTGKHDVPFLLSMANAGANTNGSQFFITTVPTPHLDGKHV 148          
The following BLAST results are available for this feature:
BLAST of CF504261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 220
Match NameE-valueIdentityDescription
PPIA_STRCH8.519e-3159.48Peptidyl-prolyl cis-trans isomerase A OS=Streptomy... [more]
PPIB_MOUSE1.372e-3054.31Peptidyl-prolyl cis-trans isomerase B OS=Mus muscu... [more]
PPIB_BOVIN1.787e-3054.31Peptidyl-prolyl cis-trans isomerase B OS=Bos tauru... [more]
PPID_CANGA2.306e-3056.78Peptidyl-prolyl cis-trans isomerase D OS=Candida g... [more]
CYP1_BRUMA2.479e-3056.41Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia ma... [more]
PPIB_RAT3.945e-3053.45Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]
PPID_CRYNE4.228e-3056.90Peptidyl-prolyl cis-trans isomerase D OS=Cryptococ... [more]
PPIB_GIBZE5.141e-3055.17Peptidyl-prolyl cis-trans isomerase B OS=Gibberell... [more]
PPIA_SCHMA5.169e-3055.17Peptidyl-prolyl cis-trans isomerase OS=Schistosoma... [more]
PPID_USTMA5.522e-3055.17Peptidyl-prolyl cis-trans isomerase D OS=Ustilago ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-750 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504261 ID=CF504261; Name=CF504261; organism=Citrus sinensis; type=EST; length=413bp
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAG
CCTCTCCACTACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACATTT
GTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAGGCCATCGAGAA
AGTGGGGTCCAGC
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