CF504261

Overview
NameCF504261
Unique NameCF504261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIB_HUMAN (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 6.689e-30
Identity = 62/116 (53.45%), Postives = 71/116 (61.21%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R++  LF    P+T +NF AL TGEKG G       YK S FHRVI  FM Q            +SIYG +F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKH+
Sbjct:   59 RVIFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHV 167          

HSP 2 Score: 26.5646 bits (57), Expect = 6.689e-30
Identity = 10/16 (62.50%), Postives = 15/16 (93.75%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIE 398
            VFG+V+EGM+VV+ +E
Sbjct:  168 VFGKVLEGMEVVRKVE 183          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIA_PARPR (Peptidyl-prolyl cis-trans isomerase OS=Paramecium primaurelia PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.765e-30
Identity = 64/116 (55.17%), Postives = 73/116 (62.93%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            +IV +L+ DV P+TA NFR L TG +G G       YKGS FHRVI  FM Q            +SIYG KFADENF  KHT P +LSMANAGP TNGSQFF+      WLDGKH+
Sbjct:   17 KIVFKLYDDVVPKTAANFRELATGSRGFG-------YKGSVFHRVITDFMAQGGDFTNFNGTGGKSIYGEKFADENFKLKHTKPALLSMANAGPNTNGSQFFITFVPCPWLDGKHV 125          

HSP 2 Score: 23.0978 bits (48), Expect = 8.765e-30
Identity = 9/20 (45.00%), Postives = 14/20 (70.00%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG+VV+G D ++  +K  S
Sbjct:  126 VFGEVVDGFDTLELFKKNSS 145          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPID_KLULA (Peptidyl-prolyl cis-trans isomerase D OS=Kluyveromyces lactis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.419e-30
Identity = 67/118 (56.78%), Postives = 73/118 (61.86%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGK--PLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV EL++DV P+TAENF  LC G  G  KS    PL YKGS FHRVI  FMCQ            ESIYG KF DENF  KH  P +LSMANAG  TNGSQ F+    T  LDGKH+
Sbjct:   21 RIVFELYSDVVPKTAENFLKLCEGNSGFAKSKPDIPLSYKGSIFHRVIKSFMCQFGDFTNFNGTGGESIYGEKFEDENFTLKHDKPFLLSMANAGANTNGSQCFITCVPTPHLDGKHV 138          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.477e-29
Identity = 61/116 (52.59%), Postives = 72/116 (62.07%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI++ LF    P+T ENF+ L  G +   K G+   YKGS+FHRVI  FM Q             SIYG +F DENF  +H G G LSMANAGP TNGSQFF+ T KT WLDGKH+
Sbjct:   47 RIIIGLFGKTVPKTVENFKQLSIGTQL--KDGRTASYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHV 160          

HSP 2 Score: 27.335 bits (59), Expect = 1.477e-29
Identity = 11/16 (68.75%), Postives = 15/16 (93.75%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIE 398
            VFG+VVEGM++V+ IE
Sbjct:  161 VFGKVVEGMNIVRQIE 176          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.675e-29
Identity = 65/118 (55.08%), Postives = 73/118 (61.86%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGK--PLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV EL+ D+ P+TAENF  LC G  G+ K+    PL YKGS FHRVI  FMCQ            ESIY  KF DENF  KH  P +LSMANAGP TNGSQ F+    T  LDGKH+
Sbjct:   19 RIVFELYNDIVPKTAENFLKLCEGNAGMAKTKPDVPLSYKGSIFHRVIKDFMCQFGDFTNFNGTGGESIYDEKFEDENFTVKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHV 136          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.527e-29
Identity = 65/116 (56.03%), Postives = 70/116 (60.34%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV+ LF  V P+T ENF AL TGEKG G       YKGS FHRVI  FM Q             SIYG  F DENF  KH G G +SMANAGP TNGSQFF+   K  WLDGKH+
Sbjct:   53 RIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHV 161          

HSP 2 Score: 25.0238 bits (53), Expect = 5.527e-29
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIE 398
            VFG+V++GM VV +IE
Sbjct:  162 VFGKVIDGMTVVHSIE 177          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIC_MOUSE (Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus GN=Ppic PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 9.370e-29
Identity = 65/116 (56.03%), Postives = 71/116 (61.21%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV+ LF +V P+T ENF AL TGEKG G       YKGS FHRVI  FM Q             SIYG  F DENF  KH G G +SMANAGP TNGSQFF+   K  WLDGKH+
Sbjct:   53 RIVIGLFGNVVPKTVENFVALATGEKGYG-------YKGSIFHRVIKDFMIQGGDFTARDGTGGMSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHV 161          

HSP 2 Score: 24.2534 bits (51), Expect = 9.370e-29
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIE 398
            VFG+V++GM VV +IE
Sbjct:  162 VFGKVLDGMTVVHSIE 177          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.220e-28
Identity = 65/116 (56.03%), Postives = 70/116 (60.34%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV+ LF  V P+T ENF AL TGEKG G       YKGS FHRVI  FM Q             SIYG  F DENF  KH G G +SMANAGP TNGSQFF+   K  WLDGKH+
Sbjct:   53 RIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHV 161          

HSP 2 Score: 24.2534 bits (51), Expect = 1.220e-28
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIE 398
            VFG+V++GM VV +IE
Sbjct:  162 VFGKVLDGMTVVHSIE 177          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.068e-28
Identity = 59/116 (50.86%), Postives = 70/116 (60.34%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI++ LF    P+T ENF+ L  G     K G+   YKGS+FHRVI  FM Q             SIYG +F DENF  KH G G LSMANAGP TNG+QFF+ T +  WLDGKH+
Sbjct:   47 RIIIGLFGKTVPKTVENFKQLSIGT--TLKDGRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHV 160          

HSP 2 Score: 27.7202 bits (60), Expect = 2.068e-28
Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEKV 404
            VFG+VVEGM VV+ IE +
Sbjct:  161 VFGKVVEGMSVVRQIENM 178          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIH_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizosaccharomyces pombe GN=cyp3 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.077e-28
Identity = 58/117 (49.57%), Postives = 76/117 (64.96%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSK-FADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI + LF+ + P+TAENFR  CTGE  +G + KP+ YK S+FHR+I GFM Q             +I+ S+ F DENF  KH  PG+LSMANAG  +NG QFF+ T   ++LDGKH+
Sbjct:   20 RIKIRLFSSIVPKTAENFRQFCTGET-LGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHV 135          

HSP 2 Score: 28.1054 bits (61), Expect = 2.077e-28
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIE 398
            VFG+V+EG D+VK IE
Sbjct:  136 VFGEVIEGYDIVKEIE 151          
The following BLAST results are available for this feature:
BLAST of CF504261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 220
Match NameE-valueIdentityDescription
PPIB_HUMAN6.689e-3053.45Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]
PPIA_PARPR8.765e-3055.17Peptidyl-prolyl cis-trans isomerase OS=Paramecium ... [more]
PPID_KLULA9.419e-3056.78Peptidyl-prolyl cis-trans isomerase D OS=Kluyverom... [more]
PPIB_SCHMA1.477e-2952.59Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPID_YEAST4.675e-2955.08Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]
PPIC_HUMAN5.527e-2956.03Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
PPIC_MOUSE9.370e-2956.03Peptidyl-prolyl cis-trans isomerase C OS=Mus muscu... [more]
PPIC_BOVIN1.220e-2856.03Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]
PPIB_SCHJA2.068e-2850.86Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIH_SCHPO2.077e-2849.57Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-750 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504261 ID=CF504261; Name=CF504261; organism=Citrus sinensis; type=EST; length=413bp
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAG
CCTCTCCACTACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACATTT
GTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAGGCCATCGAGAA
AGTGGGGTCCAGC
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