CF504261

Overview
NameCF504261
Unique NameCF504261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIL1_SCHPO (Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizosaccharomyces pombe GN=ppi1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.480e-19
Identity = 54/116 (46.55%), Postives = 65/116 (56.03%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKH 346
            +I++EL+ +  P+T +NF  L           K  +Y G  FHRVIP F+ Q             SIYG KF DE +    HTG GILSMANAGP TN SQFF+  A T WLDGKH
Sbjct:   12 KILIELYTEHAPKTCQNFYTLA----------KEGYYDGVIFHRVIPDFVIQGGDPTGTGRGGT-SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKH 116          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.276e-18
Identity = 54/113 (47.79%), Postives = 63/113 (55.75%), Query Frame = 2
Query:   11 MELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKH 346
            +EL+    P+T +NF  L   ++G        +Y    FHR+IP FM Q             SIYG KF DE     KHTG GILSMAN+GP TNGSQFFV  A T WLDGKH
Sbjct:   16 VELYNSHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIRADLKHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKH 117          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIL1_EMENI (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emericella nidulans GN=cyp1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.666e-18
Identity = 53/113 (46.90%), Postives = 63/113 (55.75%), Query Frame = 2
Query:   11 MELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKH 346
            +EL+    P+T +NF  L   ++G        +Y    FHR+IP FM Q             SIYG KF DE     KHTG GILSMAN+GP TNGSQFF+  A T WLDGKH
Sbjct:   16 VELYNSHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIRSDLKHTGAGILSMANSGPNTNGSQFFITLAPTPWLDGKH 117          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus fumigatus GN=cyp1 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.176e-18
Identity = 52/113 (46.02%), Postives = 63/113 (55.75%), Query Frame = 2
Query:   11 MELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKH 346
            +EL+ +  P+T  NF  L   ++G        +Y    FHR+IP FM Q             SIYG KF DE     KHTG G+LSMAN+GP TNGSQFF+  A T WLDGKH
Sbjct:   16 VELYNEHAPKTCRNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIHPGLKHTGAGVLSMANSGPNTNGSQFFITLAPTPWLDGKH 117          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIL1_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neurospora crassa GN=cyp-1 PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.843e-18
Identity = 52/113 (46.02%), Postives = 64/113 (56.64%), Query Frame = 2
Query:   11 MELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKH 346
            +EL+ +  P+T +NF  L   ++G        +Y  + FHR+I  FM Q             SIYG KF DE     KHTG G+LSMANAGP TNGSQFF+  A T WLDGKH
Sbjct:   16 LELYTNHAPKTCKNFATLA--DRG--------YYDSTVFHRIIKDFMIQGGDPTGTGRGG-SSIYGEKFEDEIHPGLKHTGAGVLSMANAGPNTNGSQFFITLAPTPWLDGKH 117          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIL1_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus musculus GN=Ppil1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.333e-18
Identity = 54/115 (46.96%), Postives = 65/115 (56.52%), Query Frame = 2
Query:    5 IVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKH 346
            IV+EL+    P+T +NF  L    +G        +Y G+ FHR+I  FM Q             SIYG +F DE     K TG GIL+MANAGP TNGSQFFV  A T+WLDGKH
Sbjct:   23 IVLELYWKHAPKTCKNFAELA--RRG--------YYNGTKFHRIIKDFMIQGGDPTGTGRGGA-SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKH 126          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIL1_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo sapiens GN=PPIL1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.333e-18
Identity = 54/115 (46.96%), Postives = 65/115 (56.52%), Query Frame = 2
Query:    5 IVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKH 346
            IV+EL+    P+T +NF  L    +G        +Y G+ FHR+I  FM Q             SIYG +F DE     K TG GIL+MANAGP TNGSQFFV  A T+WLDGKH
Sbjct:   23 IVLELYWKHAPKTCKNFAELA--RRG--------YYNGTKFHRIIKDFMIQGGDPTGTGRGGA-SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKH 126          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIL1_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos taurus GN=PPIL1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.333e-18
Identity = 54/115 (46.96%), Postives = 65/115 (56.52%), Query Frame = 2
Query:    5 IVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKH 346
            IV+EL+    P+T +NF  L    +G        +Y G+ FHR+I  FM Q             SIYG +F DE     K TG GIL+MANAGP TNGSQFFV  A T+WLDGKH
Sbjct:   23 IVLELYWKHAPKTCKNFAELA--RRG--------YYNGTKFHRIIKDFMIQGGDPTGTGRGGA-SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKH 126          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPNG (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus niger GN=cypC PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.842e-17
Identity = 52/113 (46.02%), Postives = 62/113 (54.87%), Query Frame = 2
Query:   11 MELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKH 346
            +EL+    P+T +NF  L   ++G        +Y    FHR+IP FM Q             SIYG KF DE N   KHTG GILSMAN+GP  NGSQFF+  A   WLDGKH
Sbjct:   16 VELYNAHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEINPNLKHTGAGILSMANSGPNNNGSQFFITLAPQPWLDGKH 117          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: CYP15_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizopus oryzae GN=cyp15 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-16
Identity = 51/115 (44.35%), Postives = 59/115 (51.30%), Query Frame = 2
Query:    5 IVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKH 346
            I M LF D  P+  ENF           K+G   +Y    FHRVI GFM Q            ESI+G  F DE   + +H  P  +SMANAGP TNGSQFF+  A T WLD KH
Sbjct:  488 IHMRLFPDAAPKAVENFTTHA-------KNG---YYDNLIFHRVIKGFMIQTGCPFGDGTGG-ESIWGDDFEDEFSREFRHDRPYTVSMANAGPNTNGSQFFITVAPTTWLDNKH 591          

HSP 2 Score: 25.409 bits (54), Expect = 1.196e-16
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIE 398
            VFG+V  GMDVV +IE
Sbjct:  593 VFGRVTAGMDVVHSIE 608          
The following BLAST results are available for this feature:
BLAST of CF504261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 220
Match NameE-valueIdentityDescription
PPIL1_SCHPO7.480e-1946.55Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizo... [more]
PPIL1_ASPOR1.276e-1847.79Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_EMENI1.666e-1846.90Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emer... [more]
PPIL1_ASPFU2.176e-1846.02Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_NEUCR2.843e-1846.02Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neur... [more]
PPIL1_MOUSE6.333e-1846.96Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus ... [more]
PPIL1_HUMAN6.333e-1846.96Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo... [more]
PPIL1_BOVIN6.333e-1846.96Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos ... [more]
PPIL1_ASPNG1.842e-1746.02Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
CYP15_RHIOR1.196e-1644.35Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizo... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-750 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504261 ID=CF504261; Name=CF504261; organism=Citrus sinensis; type=EST; length=413bp
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAG
CCTCTCCACTACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACATTT
GTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAGGCCATCGAGAA
AGTGGGGTCCAGC
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