CF504261

Overview
NameCF504261
Unique NameCF504261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLA (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates lar GN=PPIA PE=3 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 3.212e-43
Identity = 79/116 (68.10%), Postives = 86/116 (74.14%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKH+
Sbjct:   19 RVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHV 127

HSP 2 Score: 29.6462 bits (65), Expect = 3.212e-43
Identity = 12/20 (60.00%), Postives = 18/20 (90.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG+V EGM++V+A+E+ GS
Sbjct:  128 VFGKVKEGMNIVEAMERFGS 147
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIA_HUMAN (Peptidyl-prolyl cis-trans isomerase A OS=Homo sapiens GN=PPIA PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.212e-43
Identity = 79/116 (68.10%), Postives = 86/116 (74.14%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKH+
Sbjct:   19 RVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHV 127

HSP 2 Score: 29.6462 bits (65), Expect = 3.212e-43
Identity = 12/20 (60.00%), Postives = 18/20 (90.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG+V EGM++V+A+E+ GS
Sbjct:  128 VFGKVKEGMNIVEAMERFGS 147
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIA_GORGO (Peptidyl-prolyl cis-trans isomerase A OS=Gorilla gorilla gorilla GN=PPIA PE=3 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 3.212e-43
Identity = 79/116 (68.10%), Postives = 86/116 (74.14%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKH+
Sbjct:   19 RVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHV 127

HSP 2 Score: 29.6462 bits (65), Expect = 3.212e-43
Identity = 12/20 (60.00%), Postives = 18/20 (90.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG+V EGM++V+A+E+ GS
Sbjct:  128 VFGKVKEGMNIVEAMERFGS 147
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIA_CERAE (Peptidyl-prolyl cis-trans isomerase A OS=Cercopithecus aethiops GN=PPIA PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.212e-43
Identity = 79/116 (68.10%), Postives = 86/116 (74.14%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKH+
Sbjct:   19 RVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHV 127

HSP 2 Score: 29.6462 bits (65), Expect = 3.212e-43
Identity = 12/20 (60.00%), Postives = 18/20 (90.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG+V EGM++V+A+E+ GS
Sbjct:  128 VFGKVKEGMNIVEAMERFGS 147
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIA_PIG (Peptidyl-prolyl cis-trans isomerase A OS=Sus scrofa GN=PPIA PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 4.186e-43
Identity = 79/116 (68.10%), Postives = 86/116 (74.14%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKH+
Sbjct:   19 RVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHV 127

HSP 2 Score: 29.6462 bits (65), Expect = 4.186e-43
Identity = 12/20 (60.00%), Postives = 18/20 (90.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG+V EGM++V+A+E+ GS
Sbjct:  128 VFGKVKEGMNIVEAMERFGS 147
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIA_BOVIN (Peptidyl-prolyl cis-trans isomerase A OS=Bos taurus GN=PPIA PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 4.186e-43
Identity = 79/116 (68.10%), Postives = 86/116 (74.14%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKH+
Sbjct:   19 RVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHV 127

HSP 2 Score: 29.6462 bits (65), Expect = 4.186e-43
Identity = 12/20 (60.00%), Postives = 18/20 (90.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG+V EGM++V+A+E+ GS
Sbjct:  128 VFGKVKEGMNIVEAMERFGS 147
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIF_BOVIN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Bos taurus GN=PPIF PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 5.433e-43
Identity = 77/116 (66.38%), Postives = 87/116 (75.00%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+V+EL ADV P+TAENFRALCTGEKG G       YKGS+FHRVIP FMCQ            +SIYGS+F DENF  KH GPG+LSMANAGP TNGSQFF+CT KT+WLDGKH+
Sbjct:   62 RVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFKLKHEGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHV 170

HSP 2 Score: 31.5722 bits (70), Expect = 5.433e-43
Identity = 15/20 (75.00%), Postives = 15/20 (75.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG V EGMDVVK IE  GS
Sbjct:  171 VFGHVKEGMDVVKKIESFGS 190
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: CP20A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana GN=CYP20-1 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 7.083e-43
Identity = 78/116 (67.24%), Postives = 85/116 (73.28%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIVM LF    P+T ENFRALCTGEKG+GK+GK LHYKGSSFHR+IP FM Q            ESIYG KFADENF  KHTGPG LSMANAG  TNGSQFF+ T  T WLDG+H+
Sbjct:   50 RIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHV 165

HSP 2 Score: 26.9498 bits (58), Expect = 7.083e-43
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG+VV GMDVV  +E  G+
Sbjct:  166 VFGKVVTGMDVVYKVEAEGN 185
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 OS=Synechocystis sp. (strain PCC 6803) GN=slr1251 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.206e-42
Identity = 80/116 (68.97%), Postives = 87/116 (75.00%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIVMELF +VTP+TAENFRALCTGEKGVGK+GKPLH+KGS FHRVI  FM Q            ESIYG KFADENF  KH  PG+LSMANAGP TNGSQFF+      WLDGKH+
Sbjct:   18 RIVMELFDEVTPKTAENFRALCTGEKGVGKAGKPLHFKGSHFHRVITDFMAQGGDFTRGNGTGGESIYGEKFADENFQLKHDRPGLLSMANAGPNTNGSQFFLTFVPCPWLDGKHV 133

HSP 2 Score: 26.9498 bits (58), Expect = 1.206e-42
Identity = 10/20 (50.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG+VVEG+++++ +E  GS
Sbjct:  134 VFGEVVEGLEILEQLEANGS 153
[Close]
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIA_FELCA (Peptidyl-prolyl cis-trans isomerase A OS=Felis catus GN=PPIA PE=2 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 1.207e-42
Identity = 78/116 (67.24%), Postives = 86/116 (74.14%), Query Frame = 2 
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+  +LFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKH+
Sbjct:   19 RVSFDLFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHV 127

HSP 2 Score: 29.261 bits (64), Expect = 1.207e-42
Identity = 12/20 (60.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG V EGM++V+A+E+ GS
Sbjct:  128 VFGMVKEGMNIVEAMERFGS 147
The following BLAST results are available for this feature:
BLAST of CF504261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 220
Match NameE-valueIdentityDescription
PPIA_HYLLA3.212e-4368.10Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HUMAN3.212e-4368.10Peptidyl-prolyl cis-trans isomerase A OS=Homo sapi... [more]
PPIA_GORGO3.212e-4368.10Peptidyl-prolyl cis-trans isomerase A OS=Gorilla g... [more]
PPIA_CERAE3.212e-4368.10Peptidyl-prolyl cis-trans isomerase A OS=Cercopith... [more]
PPIA_PIG4.186e-4368.10Peptidyl-prolyl cis-trans isomerase A OS=Sus scrof... [more]
PPIA_BOVIN4.186e-4368.10Peptidyl-prolyl cis-trans isomerase A OS=Bos tauru... [more]
PPIF_BOVIN5.433e-4366.38Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
CP20A_ARATH7.083e-4367.24Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Ara... [more]
PPI2_SYNY31.206e-4268.97Peptidyl-prolyl cis-trans isomerase slr1251 OS=Syn... [more]
PPIA_FELCA1.207e-4267.24Peptidyl-prolyl cis-trans isomerase A OS=Felis cat... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-750 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504261 ID=CF504261; Name=CF504261; organism=Citrus sinensis; type=EST; length=413bp
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAG
CCTCTCCACTACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACATTT
GTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAGGCCATCGAGAA
AGTGGGGTCCAGC
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