CF504261

Overview
NameCF504261
Unique NameCF504261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIE_RHIOR (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus oryzae GN=cyp10 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.517e-39
Identity = 75/116 (64.66%), Postives = 81/116 (69.83%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI +EL  DV P+TAENFRALCTGE G G       YK SSFHR+IP FMCQ            +SIYG KF DENFV KHTGPG LSMANAG  TNGSQFF+CT KT WLDGKH+
Sbjct:  170 RIEIELRGDVVPKTAENFRALCTGEAGFG-------YKKSSFHRIIPQFMCQGGDFTKGNGTGGKSIYGGKFEDENFVLKHTGPGTLSMANAGSNTNGSQFFICTEKTTWLDGKHV 278          

HSP 2 Score: 30.8018 bits (68), Expect = 1.517e-39
Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEKVGSS 413
            VFGQVV GM+VV+ +E+ GS+
Sbjct:  279 VFGQVVSGMNVVREMERCGSA 299          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.713e-39
Identity = 79/116 (68.10%), Postives = 86/116 (74.14%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV EL+ D+ P+TAENFRALCTGEKGVGK GKPLHYKGS+FHRVI  FM Q            ESIYG+KF DENF  KH  P +LSMANAGPGTNGSQFFV T  T  LDGKH+
Sbjct:   27 RIVFELYNDIVPKTAENFRALCTGEKGVGKLGKPLHYKGSTFHRVIKQFMIQGGDFTAGNGTGGESIYGAKFEDENFQLKHDRPFLLSMANAGPGTNGSQFFVTTVPTPHLDGKHV 142          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: CYP6_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizopus oryzae GN=cyp6 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.750e-39
Identity = 73/115 (63.48%), Postives = 80/115 (69.57%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKH 346
            R+  +LF+D  P+TAENFRALCTGEKG G SGKPLHYK S FHR+IPGFM Q            ESIYG  F DENF  KH G G+LSMANAGP TNGSQFF+    T WLDG H
Sbjct:   22 RMTFKLFSDTVPKTAENFRALCTGEKGKGISGKPLHYKNSYFHRIIPGFMAQGGDFTMGDGRGGESIYGRTFKDENFTLKHKGKGLLSMANAGPNTNGSQFFITFVDTPWLDGNH 136          

HSP 2 Score: 24.6386 bits (52), Expect = 9.750e-39
Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFGQ+V+G  V+  +E+ GS
Sbjct:  138 VFGQIVDGSKVLDLLEQHGS 157          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.110e-38
Identity = 77/116 (66.38%), Postives = 84/116 (72.41%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV ELF D+ P+TAENFRALCTGEKG GKSGKPL Y+GS FHR+I  FM Q            ESIYG KF DENFV KH  P +LSMANAGPGTNGSQFF+ T  T  LDGKH+
Sbjct:   19 RIVFELFKDIVPKTAENFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDENFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHV 134          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPID_EMENI (Peptidyl-prolyl cis-trans isomerase D OS=Emericella nidulans GN=cpr6 PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 5.509e-38
Identity = 76/116 (65.52%), Postives = 83/116 (71.55%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI  ELF DV P+TAENFRALCTGEKG+GK GKPLH+KGS FHRVI  FM Q            ESIYG KF DENF  KH  P +LSMAN+GPGTNGSQFF+ T  T  LDGKH+
Sbjct:   22 RIAFELFNDVVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHV 137          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PAL4A_HUMAN (Peptidylprolyl cis-trans isomerase A-like 4A OS=Homo sapiens GN=PPIAL4A PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 7.195e-38
Identity = 75/116 (64.66%), Postives = 84/116 (72.41%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI ++ FAD  P+TAENFRAL TGEKG         YKGS FHR+IPGFMCQ            +SIYG KF DEN ++KHTG GILSMANAGP TNGSQFF+CTAKTEWLDGKH+
Sbjct:   19 RISIKQFADKIPKTAENFRALSTGEKG-------FRYKGSCFHRIIPGFMCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEWLDGKHV 127          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.048e-37
Identity = 74/116 (63.79%), Postives = 80/116 (68.97%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIVM LF +V P+T ENFRALCTGEK  G       YKGSSFHR+I  FM Q             SIYG+KF DENF  KHTGPGILSMANAGP TNGSQFF+CT KT WLD KH+
Sbjct:  110 RIVMGLFGEVVPKTVENFRALCTGEKKYG-------YKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHV 218          

HSP 2 Score: 26.5646 bits (57), Expect = 1.048e-37
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIE 398
            VFGQV+EGM +V+ +E
Sbjct:  219 VFGQVIEGMKLVRTLE 234          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.056e-37
Identity = 71/116 (61.21%), Postives = 78/116 (67.24%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV +LF DV P+TA NFRALCTGEKG G       Y GS+FHRVIP FM Q            +SIYG KF DENF  KH  PG+LSMANAGP TNGSQFF+ T  T WLDGKH+
Sbjct:   17 RIVFKLFDDVVPKTAANFRALCTGEKGYG-------YAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHV 125          

HSP 2 Score: 33.8834 bits (76), Expect = 1.056e-37
Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEKVGSS 413
            VFG+V EGMDVVK +E +GS+
Sbjct:  126 VFGEVTEGMDVVKKVESLGSN 146          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.227e-37
Identity = 75/116 (64.66%), Postives = 85/116 (73.28%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI MEL+AD+ P+TA+NFR+LCTGEKG+GKSGKPLHYKGS FHRVI  FM Q            ESIYG+KF DE F  KH  P +LSMANAGP TNGSQFF+ T  T  LDGKH+
Sbjct:   26 RITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHV 141          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.374e-37
Identity = 74/115 (64.35%), Postives = 83/115 (72.17%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKH 346
            R+V EL+ D+ P+TAENFRALCTGEKG+GKSGKPLHYKGSSFHRVI  FM Q            ESIYG  F DENF+ KH   G LSMANAG  TNGSQFF+ TA+T  L+G H
Sbjct:   22 RVVFELYNDIVPKTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIKNFMVQGGDFTHGTGIGGESIYGRTFNDENFLVKHK-IGCLSMANAGKNTNGSQFFITTAETPHLNGGH 135          

HSP 2 Score: 28.4906 bits (62), Expect = 1.374e-37
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIE 398
            VFG+VVEG D+VK +E
Sbjct:  137 VFGEVVEGFDIVKKVE 152          
The following BLAST results are available for this feature:
BLAST of CF504261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 220
Match NameE-valueIdentityDescription
PPIE_RHIOR1.517e-3964.66Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]
PPID_NEUCR1.713e-3968.1041 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
CYP6_RHIOR9.750e-3963.48Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizop... [more]
PPID_RHIOR1.110e-3866.38Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
PPID_EMENI5.509e-3865.52Peptidyl-prolyl cis-trans isomerase D OS=Emericell... [more]
PAL4A_HUMAN7.195e-3864.66Peptidylprolyl cis-trans isomerase A-like 4A OS=Ho... [more]
CP20C_ARATH1.048e-3763.79Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
CYPH_SCHPO1.056e-3761.21Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]
PPID_GIBZE1.227e-3764.66Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
PPID_DICDI1.374e-3764.35Peptidyl-prolyl cis-trans isomerase D, mitochondri... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-750 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504261 ID=CF504261; Name=CF504261; organism=Citrus sinensis; type=EST; length=413bp
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAG
CCTCTCCACTACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACATTT
GTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAGGCCATCGAGAA
AGTGGGGTCCAGC
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