CF504261

Overview
NameCF504261
Unique NameCF504261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PAL4B_HUMAN (Peptidylprolyl cis-trans isomerase A-like 4B OS=Homo sapiens GN=PPIAL4B PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 7.955e-37
Identity = 74/116 (63.79%), Postives = 83/116 (71.55%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI ++LFAD   +TAENFRAL TGEKG         YKGS FHR+IPGFMCQ            +SIYG KF DEN ++KHTG GILSMANAGP TNGSQFF+C AKTEWLDGKH+
Sbjct:   19 RISIKLFADKILKTAENFRALSTGEKG-------FRYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHV 127          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIE_PONAB (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 8.673e-37
Identity = 71/116 (61.21%), Postives = 81/116 (69.83%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI M L +DV P TAENFR LCT EKG G       +KGSSFHR+IP FMCQ            +SIYG KF DENF+ KHTGPG+LSMAN+GP TNGSQFF+   KT+WLDGKH+
Sbjct:  155 RIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHV 263          

HSP 2 Score: 28.4906 bits (62), Expect = 8.673e-37
Identity = 12/20 (60.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG+V EG+DV++ IE  GS
Sbjct:  264 VFGEVTEGLDVLRQIEARGS 283          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPID_AMAMU (Peptidyl-prolyl cis-trans isomerase D OS=Amanita muscaria GN=Cyp40 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.039e-36
Identity = 71/116 (61.21%), Postives = 84/116 (72.41%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+   L++D+ P+TAENFRALCTGEKG+G+SGKPL YKGS+FHRVI GFMCQ            ESIYG KF DE F   H+ P +LSMANAGP TNGSQFF+  + T  LDGKH+
Sbjct:   20 RVAFRLYSDLVPKTAENFRALCTGEKGLGQSGKPLWYKGSAFHRVIKGFMCQGGDFTAGNGTGGESIYGEKFEDEGFPVHHSRPFLLSMANAGPNTNGSQFFITVSATPHLDGKHV 135          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 1.912e-36
Identity = 73/117 (62.39%), Postives = 83/117 (70.94%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKS-GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV+ELFAD+ P+TAENFRALCTGEKG+G + GKPLH+KG  FHR+I  FM Q            ESIYG KF DENF  KH   G+LSMANAG  TNGSQFF+ T  T  LDGKH+
Sbjct:   31 RIVLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHV 147          

HSP 2 Score: 24.2534 bits (51), Expect = 1.912e-36
Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEKV 404
            VFGQV++G+ V + +E V
Sbjct:  148 VFGQVIKGIGVARILENV 165          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.917e-36
Identity = 71/116 (61.21%), Postives = 81/116 (69.83%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI M L +DV P TAENFR LCT EKG G       +KGSSFHR+IP FMCQ            +SIYG KF DENF+ KHTGPG+LSMAN+GP TNGSQFF+   KT+WLDGKH+
Sbjct:  155 RIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHV 263          

HSP 2 Score: 27.335 bits (59), Expect = 1.917e-36
Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG++ +G+DV++ IE  GS
Sbjct:  264 VFGEITDGLDVLRQIEAQGS 283          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.921e-36
Identity = 68/116 (58.62%), Postives = 78/116 (67.24%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV+ L+ D  P+T ENFRALCTGEKG G       YKGS+FHRVI  FM Q            +S+YG  F DENF   H GPG+LSMANAGP TNGSQFF+CT KT WLDG+H+
Sbjct:  108 RIVIGLYGDDVPQTVENFRALCTGEKGFG-------YKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHV 216          

HSP 2 Score: 30.8018 bits (68), Expect = 1.921e-36
Identity = 13/17 (76.47%), Postives = 16/17 (94.12%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEK 401
            VFGQV+EGM+VVK IE+
Sbjct:  217 VFGQVIEGMEVVKLIEE 233          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIA_ECHGR (Peptidyl-prolyl cis-trans isomerase OS=Echinococcus granulosus GN=CYP-1 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.524e-36
Identity = 73/116 (62.93%), Postives = 80/116 (68.97%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV  LF DV P+T ENFRALCTGEKG G       YKGS FHR+IPGFMCQ            +SIYGSKF DENF  KH+ P +LSMANAG  TNGSQFF+ TA T WLDGKH+
Sbjct:   18 RIVFALFDDV-PKTVENFRALCTGEKGFG-------YKGSKFHRIIPGFMCQGGDFTAGNGTGGKSIYGSKFEDENFNHKHSKPMMLSMANAGKNTNGSQFFITTAVTSWLDGKHV 125          

HSP 2 Score: 29.261 bits (64), Expect = 2.524e-36
Identity = 14/21 (66.67%), Postives = 16/21 (76.19%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEKVGSS 413
            VFG+V  G DVVK +E VGSS
Sbjct:  126 VFGEVESGEDVVKDMEAVGSS 146          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 4.283e-36
Identity = 68/116 (58.62%), Postives = 77/116 (66.38%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+V +L+ D+ P+TAENFRALCTGEKG G       Y GS FHRVIP FM Q            +SIYG KF DENF K H  PG+LSMANAGP TNGSQFF+ T    WLDGKH+
Sbjct:   17 RVVFKLYNDIVPKTAENFRALCTGEKGFG-------YAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHV 125          

HSP 2 Score: 31.187 bits (69), Expect = 4.283e-36
Identity = 12/20 (60.00%), Postives = 17/20 (85.00%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEKVGS 410
            VFG+VV+G D+VK +E +GS
Sbjct:  126 VFGEVVDGYDIVKKVESLGS 145          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: CYP11_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizopus oryzae GN=cyp11 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.149e-35
Identity = 73/117 (62.39%), Postives = 83/117 (70.94%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGK-SGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV+ELFAD  P+TAENFRALCTGEKG+GK S  PLHYKGS FHR+I GFMCQ            ESIYG+ F DE+F +KH   G+LSMAN GP T  SQFF+ T  T  LDGKH+
Sbjct:   19 RIVIELFADQVPKTAENFRALCTGEKGIGKVSNMPLHYKGSIFHRIIKGFMCQGGDFTHRTGKGGESIYGANFPDESFSRKHDTHGLLSMANRGPNTQTSQFFITTRPTPHLDGKHV 135          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPID_ASPFU (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus fumigatus GN=cpr6 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.559e-35
Identity = 76/120 (63.33%), Postives = 82/120 (68.33%), Query Frame = 2
Query:    2 RIVMEL----FADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI +EL    F DV P+TAENFRALCTGEKGVGK  KPL YKGS FHRVI  FM Q            ESIYG KF DENF  KH  P +LSMAN+GPGTNGSQFF+ T  T  LDGKH+
Sbjct:   23 RIALELVRLPFNDVVPKTAENFRALCTGEKGVGKQRKPLSYKGSIFHRVIKQFMIQGGDFTNFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHV 142          
The following BLAST results are available for this feature:
BLAST of CF504261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 220
Match NameE-valueIdentityDescription
PAL4B_HUMAN7.955e-3763.79Peptidylprolyl cis-trans isomerase A-like 4B OS=Ho... [more]
PPIE_PONAB8.673e-3761.21Peptidyl-prolyl cis-trans isomerase E OS=Pongo abe... [more]
PPID_AMAMU1.039e-3661.21Peptidyl-prolyl cis-trans isomerase D OS=Amanita m... [more]
PPID_HUMAN1.912e-3662.3940 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
PPIE_BOVIN1.917e-3661.21Peptidyl-prolyl cis-trans isomerase E OS=Bos tauru... [more]
CP20B_ARATH1.921e-3658.62Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
PPIA_ECHGR2.524e-3662.93Peptidyl-prolyl cis-trans isomerase OS=Echinococcu... [more]
CYPH_YEAST4.283e-3658.62Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
CYP11_RHIOR1.149e-3562.39Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizo... [more]
PPID_ASPFU2.559e-3563.33Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-750 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504261 ID=CF504261; Name=CF504261; organism=Citrus sinensis; type=EST; length=413bp
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAG
CCTCTCCACTACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACATTT
GTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAGGCCATCGAGAA
AGTGGGGTCCAGC
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