CF504261

Overview
NameCF504261
Unique NameCF504261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11875 contig Csv1_Contig11875:121..532. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIH_NEUCR (Peptidyl-prolyl cis-trans isomerase H OS=Neurospora crassa GN=cyp-3 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 3.541e-35
Identity = 70/117 (59.83%), Postives = 78/117 (66.67%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSK-FADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI  ELF DV PRTAENFR  CTGE      G+P  YKGS FHR+IP FMCQ              IYG+K FADENF+ KH  PG+LSMANAGP TNGSQFF+ T  T +LDGKH+
Sbjct:   27 RITFELFKDVVPRTAENFRQFCTGESK-NNLGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIYGTKSFADENFLLKHDTPGLLSMANAGPNTNGSQFFITTVPTPFLDGKHV 142          

HSP 2 Score: 28.4906 bits (62), Expect = 3.541e-35
Identity = 12/16 (75.00%), Postives = 15/16 (93.75%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIE 398
            VFG+VV+GMDVVK +E
Sbjct:  143 VFGKVVDGMDVVKKME 158          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPID_ASPOR (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus oryzae GN=cpr6 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.365e-35
Identity = 73/116 (62.93%), Postives = 82/116 (70.69%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI +EL   + P+TAENFRALCTGEKG+GK GKPLH+KGS FHRVI  FM Q            ESIYG KF DENF  KH  P +LSMAN+GPGTNGSQFF+ T  T  LDGKH+
Sbjct:   23 RIALELV--LVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDKPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHV 136          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.722e-34
Identity = 67/116 (57.76%), Postives = 78/116 (67.24%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIVM L+    P+TAENFRAL TG+   G+      Y+GSSFHR+I  FM Q            +SIYGSKF DENF  KHTGPG+LSMANAG  TNGSQFF+CT KT WLD +H+
Sbjct:   60 RIVMGLYGKTVPKTAENFRALATGKNSDGED-LGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHV 174          

HSP 2 Score: 30.0314 bits (66), Expect = 1.722e-34
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEKVGSS 413
            VFG V+EGMDVV A+E V +S
Sbjct:  175 VFGHVLEGMDVVYAMENVKTS 195          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: CYPH_NEUCR (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Neurospora crassa GN=NCU00726 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.724e-34
Identity = 68/116 (58.62%), Postives = 77/116 (66.38%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI   L+ DV P+TA NF+ LCTG+ G G       YKGSSFHR+IP FM Q            +SIYG KFADENF KKH  PG+LSMANAGP TNGSQFFV T  T WLDG+H+
Sbjct:   74 RINFTLYDDVVPKTARNFKELCTGQNGFG-------YKGSSFHRIIPEFMLQGGDFTRGNGTGGKSIYGEKFADENFAKKHVRPGLLSMANAGPNTNGSQFFVTTVPTSWLDGRHV 182          

HSP 2 Score: 25.7942 bits (55), Expect = 1.724e-34
Identity = 14/23 (60.87%), Postives = 16/23 (69.57%), Query Frame = 3
Query:  351 VFGQVV--EGMDVVKAIEKVGSS 413
            VFG+V   E M VVKA+E  GSS
Sbjct:  183 VFGEVADDESMKVVKALEATGSS 205          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.929e-34
Identity = 67/116 (57.76%), Postives = 77/116 (66.38%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV+ L+ +V P+T ENFRAL TGEKG G       YK S FHRVI  FM Q            +SIYG +FADENF  +HTGPGILSMANAG  TNGSQFF+ T  T WLDG+H+
Sbjct:   45 RIVLGLYGEVVPKTVENFRALATGEKGYG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFFITTVTTSWLDGRHV 153          

HSP 2 Score: 30.0314 bits (66), Expect = 2.929e-34
Identity = 13/16 (81.25%), Postives = 15/16 (93.75%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIE 398
            VFG+V+EGMDVV AIE
Sbjct:  154 VFGKVIEGMDVVTAIE 169          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPID_DEBHA (Peptidyl-prolyl cis-trans isomerase D OS=Debaryomyces hansenii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.303e-34
Identity = 71/117 (60.68%), Postives = 80/117 (68.38%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKS-GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+V EL+ DV P+TAENFRALCTGEKG  +S GK LHYKGS FHR+I  FMCQ            ESIYG KF DENF   H  P +LSMANAG  TNGSQFF+ T  T  L+GKH+
Sbjct:   23 RVVFELYNDVVPKTAENFRALCTGEKGASESSGKQLHYKGSIFHRIIKDFMCQGGDFTHGSGIGGESIYGEKFEDENFQLTHDKPFLLSMANAGANTNGSQFFITTVPTPHLNGKHV 139          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.094e-33
Identity = 65/116 (56.03%), Postives = 75/116 (64.66%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RIV+ LF D  P+T ENF+ L TG KG G       Y+GS FHR+IP FM Q             SIYGSKF DE+F  KH GPG+LSMANAGP TNGSQFF+CT  T WLD +H+
Sbjct:   97 RIVIGLFGDAVPKTVENFKTLSTGAKGYG-------YQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHV 205          

HSP 2 Score: 28.4906 bits (62), Expect = 1.094e-33
Identity = 12/21 (57.14%), Postives = 16/21 (76.19%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEKVGSS 413
            VFG V+EG+DVVK +E   +S
Sbjct:  206 VFGHVIEGLDVVKQLESQETS 226          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPID_YARLI (Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia lipolytica GN=CPR6 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.128e-33
Identity = 70/116 (60.34%), Postives = 79/116 (68.10%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            +I  ELFAD  P+TAENFRALCTGEKG  ++G PLH+KGSSFHRVI  FM Q            ESIYG KF DE F   H  P +LSMANAGP TNGSQFF+ T +T  LD KH+
Sbjct:   19 KIYFELFADKVPKTAENFRALCTGEKGNTQAGIPLHFKGSSFHRVIKDFMVQGGDFTAGNGTGGESIYGEKFPDEAFPYPHDQPFLLSMANAGPNTNGSQFFITTTETPHLDNKHV 134          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPID_ASHGO (Peptidyl-prolyl cis-trans isomerase D OS=Ashbya gossypii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.076e-33
Identity = 68/118 (57.63%), Postives = 79/118 (66.95%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGV--GKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            R+V E+++DVTP+TAENF  LC G+ G    K G PL Y+GS FHRVI GFMCQ            ESIYG KF DENF +KH  P +LSMANAGP TNGSQ F+  A T  LDGKH+
Sbjct:   20 RVVFEVYSDVTPKTAENFVRLCAGDAGECRTKPGVPLCYQGSLFHRVIKGFMCQFGDFTNGDGTGGESIYGEKFEDENFARKHDRPFLLSMANAGPNTNGSQCFITCAPTPHLDGKHV 137          

HSP 2 Score: 25.7942 bits (55), Expect = 4.076e-33
Identity = 10/17 (58.82%), Postives = 15/17 (88.24%), Query Frame = 3
Query:  351 VFGQVVEGMDVVKAIEK 401
            VFG+V++G  VV+AIE+
Sbjct:  138 VFGEVIQGKRVVRAIER 154          
BLAST of CF504261 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.086e-33
Identity = 69/116 (59.48%), Postives = 78/116 (67.24%), Query Frame = 2
Query:    2 RIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHI 349
            RI  +LF DV P+TA+NFRALCTGE+G G       YKGS FHRVIP FM Q            +SIYG KFADENF  KH+ PG+LSMANAGP TNGSQFF+ T    WLDG H+
Sbjct:   16 RIEFQLFEDVVPKTAKNFRALCTGEQGFG-------YKGSKFHRVIPQFMLQGGDFTRGDGTGGKSIYGEKFADENFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHV 124          
The following BLAST results are available for this feature:
BLAST of CF504261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 220
Match NameE-valueIdentityDescription
PPIH_NEUCR3.541e-3559.83Peptidyl-prolyl cis-trans isomerase H OS=Neurospor... [more]
PPID_ASPOR4.365e-3562.93Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPIB_CRYNE1.722e-3457.76Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
CYPH_NEUCR1.724e-3458.62Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIB_ORPSP2.929e-3457.76Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyc... [more]
PPID_DEBHA6.303e-3460.68Peptidyl-prolyl cis-trans isomerase D OS=Debaryomy... [more]
CYPB_VICFA1.094e-3356.03Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
PPID_YARLI3.128e-3360.34Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia ... [more]
PPID_ASHGO4.076e-3357.63Peptidyl-prolyl cis-trans isomerase D OS=Ashbya go... [more]
PPIA2_RHIOR4.086e-3359.48Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-750 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504261 ID=CF504261; Name=CF504261; organism=Citrus sinensis; type=EST; length=413bp
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAG
CCTCTCCACTACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACATTT
GTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAGGCCATCGAGAA
AGTGGGGTCCAGC
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