CF504267
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_STAES (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.718e-20 Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = 1 Query: 31 IVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT--AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMS-DPGSTYRTRDE 450 I+GAQ G+AF K V GDG ++QG +E +N A+ + PAI V +NN+Y + T ++ AA++ + +PG++VDGMDALAV QA A+E A+ GP ++E TYRY H+M+ D + YRT DE Sbjct: 145 IIGAQYIQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQATLEARERAVAGEGPTVIETLTYRYGPHTMAGDDPTRYRTSDE 288
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_STAEQ (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.718e-20 Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = 1 Query: 31 IVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT--AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMS-DPGSTYRTRDE 450 I+GAQ G+AF K V GDG ++QG +E +N A+ + PAI V +NN+Y + T ++ AA++ + +PG++VDGMDALAV QA A+E A+ GP ++E TYRY H+M+ D + YRT DE Sbjct: 145 IIGAQYIQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQATLEARERAVAGEGPTVIETLTYRYGPHTMAGDDPTRYRTSDE 288
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODBA_BACSU (2-oxoisovalerate dehydrogenase subunit alpha OS=Bacillus subtilis GN=bfmBAA PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.113e-19 Identity = 55/147 (37.41%), Postives = 80/147 (54.42%), Query Frame = 1 Query: 22 GHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTA--EWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEI 453 G V Q+P G+A A + K + F +G+G++NQG E N AA+ LP I +CENN Y + + A ++ S G +PG+ V+G D L V QA K A+E A + GP ++E +YR HS D S+YR R+E+ Sbjct: 121 GSSPVTTQVPHAVGIALAGRMEKKDIAAFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAISVPYDKQVACENISDRAIGYGMPGVTVNGNDPLEVYQAVKEARERARRGEGPTLIETISYRLTPHSSDDDDSSYRGREEV 267
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_BACCE (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus cereus GN=pdhA PE=1 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 1.899e-19 Identity = 56/143 (39.16%), Postives = 81/143 (56.64%), Query Frame = 1 Query: 31 IVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT--AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMS-DPGSTYRTRD 447 I+GAQI G+A K ++V GDG A+QG +E +N A + PAI V +NN Y + T + AAK+ + + G++VDGMD LAV A FA+E A+ GP ++E T+RY H+M+ D + YRT+D Sbjct: 146 IIGAQIIQTAGVALGMKLRGKKSVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAISTPVEKQSAAKTVAQKAVAAGIYGIQVDGMDPLAVYAATAFARERAVNGEGPTLIETLTFRYGPHTMAGDDPTRYRTKD 288
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODBA_THET2 (2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1757 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.231e-18 Identity = 49/144 (34.03%), Postives = 74/144 (51.39%), Query Frame = 1 Query: 34 VGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEIS 456 + + +P G A + K + V +GDGA ++G + +N AA+ PA+ VCENN Y + SP+ + +PG VDGMD LA K A E A + GP ++E+ YRY HS +D S YR ++E++ Sbjct: 146 IASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFVCENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVA 289
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODPA_ACHLA (Pyruvate dehydrogenase E1 component subunit alpha (Fragment) OS=Acholeplasma laidlawii GN=pdhA PE=4 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.608e-18 Identity = 55/144 (38.19%), Postives = 81/144 (56.25%), Query Frame = 1 Query: 31 IVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMS-DPGSTYRTRDE 450 I+G+Q + GLA A K K VT GDG G+ +E LN AA + P + V +NN + + T +A+ S + ++G +P ++VDG D LA+ A K A + A K +GP ++E TYR H+ S DP S YRT++E Sbjct: 117 IIGSQSNIAAGLAMASKIRKTNEVTAFTIGDGGTAHGEFYEGLNFAASFKAPVVAVIQNNQWAISTPVRKASNSETLAQKGVAFGIPYIQVDGNDMLAMYVASKEAMDRARKGDGPTLIEAFTYRMGPHTTSDDPCSIYRTKEE 260
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODBA_THET8 (2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0229 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.778e-17 Identity = 47/144 (32.64%), Postives = 73/144 (50.69%), Query Frame = 1 Query: 34 VGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEIS 456 + + +P G A + K + V +GDGA ++G + +N AA+ PA+ + ENN Y + SP+ + +PG VDGMD LA K A E A + GP ++E+ YRY HS +D S YR ++E++ Sbjct: 146 IASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVA 289
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODBA_PANTR (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Pan troglodytes GN=BCKDHA PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.960e-17 Identity = 52/149 (34.90%), Postives = 74/149 (49.66%), Query Frame = 1 Query: 34 VGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT-------AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHAL-KNGPMILEMDTYRYHGHSMSDPGSTYRTRDEIS 456 + QIP G A+A K + V +G+GAA++G N AA + P I C NN Y + T + AA+ P Y + ++VDG D AV A K A+ A+ +N P ++E TYR HS SD S YR+ DE++ Sbjct: 209 LATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGY-----GIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVN 352
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODBA_MOUSE (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Mus musculus GN=Bckdha PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.960e-17 Identity = 51/149 (34.23%), Postives = 74/149 (49.66%), Query Frame = 1 Query: 34 VGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT-------AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHAL-KNGPMILEMDTYRYHGHSMSDPGSTYRTRDEIS 456 + QIP G A+A K + + +G+GAA++G N AA + P I C NN Y + T + AA+ P Y + ++VDG D AV A K A+ A+ +N P ++E TYR HS SD S YR+ DE++ Sbjct: 206 LATQIPQAVGAAYAAKRANANRIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGY-----GIKSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVN 349
BLAST of CF504267 vs. ExPASy Swiss-Prot
Match: ODBA_MACFA (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Macaca fascicularis GN=BCKDHA PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.960e-17 Identity = 52/149 (34.90%), Postives = 74/149 (49.66%), Query Frame = 1 Query: 34 VGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT-------AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHAL-KNGPMILEMDTYRYHGHSMSDPGSTYRTRDEIS 456 + QIP G A+A K + V +G+GAA++G N AA + P I C NN Y + T + AA+ P Y + ++VDG D AV A K A+ A+ +N P ++E TYR HS SD S YR+ DE++ Sbjct: 209 LATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGY-----GIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVN 352 The following BLAST results are available for this feature:
BLAST of CF504267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504267 ID=CF504267; Name=CF504267; organism=Citrus sinensis; type=EST; length=456bpback to top |