CF504274

Overview
NameCF504274
Unique NameCF504274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length636
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12236 contig Csv1_Contig12236:18..653. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.870e-12
Identity = 56/179 (31.28%), Postives = 83/179 (46.37%), Query Frame = 1
Query:  178 NNHFCNFTGITCN-SDSSFVQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSFP----EISSLN---------------------ELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDNPFDPTPFPDQVVKLNKLNWLYLTNCSIDG 636
            ++H CN+TGITC  + + +V  I L + NL G +  DSIC L  L  L L  N     I   L+ CV L+ L+L +N+  G+ P    E SSL                       LQ L L  +  +G+ P  ++G ++ LV L + +N +  +  P  + KL+KL  L L      G
Sbjct:   58 SSHHCNWTGITCTRAPTLYVSSINLQSLNLSGEIS-DSICDLPYLTHLDLSLNFFNQPIPLQLSRCVTLETLNLSSNLIWGTIPDQISEFSSLKVIDFSSNHVEGMIPEDLGLLFNLQVLNLGSNLLTGIVP-PAIGKLSELVVLDLSENSYLVSEIPSFLGKLDKLEQLLLHRSGFHG 234          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.870e-12
Identity = 51/145 (35.17%), Postives = 77/145 (53.10%), Query Frame = 1
Query:  190 CNFTGITCNSDSS-------FVQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSFP-EISSLNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDNPFDPTPFPDQVVKLNKL 600
            CN+ G+ C+S  S        V  ++LS+ NL G +   SI  L  L  L+L +N+L G+I +++ NC KL+ + L NN F GS P EI+ L++L+   +  +  SG  P   +G++ NL  L    N     P P  +  LNKL
Sbjct:   66 CNWIGVNCSSQGSSSSSNSLVVTSLDLSSMNLSGIVS-PSIGGLVNLVYLNLAYNALTGDIPREIGNCSKLEVMFLNNNQFGGSIPVEINKLSQLRSFNICNNKLSGPLP-EEIGDLYNLEELVAYTNNL-TGPLPRSLGNLNKL 207          

HSP 2 Score: 68.9366 bits (167), Expect = 2.429e-11
Identity = 46/124 (37.10%), Postives = 70/124 (56.45%), Query Frame = 1
Query:  232 VQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSF-PEISSLNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDNPFDPTPFPDQVVKLNKL 600
            +Q + L+       LP + I +L  L   ++  NSL G I  ++ NC  LQ LDL  N F GS  PE+ SL++L+ L L+ + FSG  P+ ++GN+T+L  L +G N F  +  P Q+  L+ L
Sbjct:  519 LQRLHLAANQFSSNLP-NEISKLSNLVTFNVSSNSLTGPIPSEIANCKMLQRLDLSRNSFIGSLPPELGSLHQLEILRLSENRFSGNIPF-TIGNLTHLTELQMGGNLFSGS-IPPQLGLLSSL 639          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.393e-12
Identity = 51/141 (36.17%), Postives = 74/141 (52.48%), Query Frame = 1
Query:  226 SFVQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNN-CVKLQYLDLGNNVFSGS-FPEI--SSLNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDNPFDPTPFPDQVVKLNKLNWLYLTNCSIDG 636
            S ++ + LS+ N  G LP D++ +++ L  L L FN   GE+ + L N    L  LDL +N FSG   P +  +  N LQ LYL  +GF+G  P  +L N + LVSL +  N    T  P  +  L+KL  L L    ++G
Sbjct:  340 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIP-PTLSNCSELVSLHLSFNYLSGT-IPSSLGSLSKLRDLKLWLNMLEG 478          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.424e-11
Identity = 50/139 (35.97%), Postives = 70/139 (50.36%), Query Frame = 1
Query:  190 CNFTGITCNSDSSFVQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSFPE-ISSLNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDNPFDPTPFPDQVVKLNKLN 603
            CN+ G+ C  D+  V  + L    L G+LP   I  L  L  LSL FNSL G I  D +N V L+YL L  N FSG  P  + +L  +  + L  + FSG  P  ++ + T LV+L +  N     P P+  + L + N
Sbjct:   55 CNWHGVHC--DAGRVTALRLPGSGLFGSLPIGGIGNLTQLKTLSLRFNSLSGPIPSDFSNLVLLRYLYLQGNAFSGEIPSLLFTLPSIIRINLGENKFSGRIP-DNVNSATRLVTLYLERNQLS-GPIPEITLPLQQFN 189          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.429e-11
Identity = 51/146 (34.93%), Postives = 75/146 (51.37%), Query Frame = 1
Query:  190 CN-FTGITCNSDSSFVQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSFP-EISSLNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDNPFDPTPFPDQVVKLNKLNWLYLTN 621
            CN +TG+TCN D S +  + L    L G +P ++I +L AL  LSL  N + GE  KD      L +L L +N  SG  P + S    L  + L+ +GF+G  P  SL  +  + SL++ +N       PD  V L+ L  + L+N
Sbjct:   55 CNIWTGVTCNQDGSRIIAVRLPGVGLNGQIPPNTISRLSALRVLSLRSNLISGEFPKDFVELKDLAFLYLQDNNLSGPLPLDFSVWKNLTSVNLSNNGFNGTIP-SSLSRLKRIQSLNLANNTLS-GDIPDLSV-LSSLQHIDLSN 197          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.429e-11
Identity = 42/121 (34.71%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  190 CNFTGITCNSDSSFVQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSFP-EISSLNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDN 549
            CN+ G+TC++ +  V  + L+   L+G LP   + +L  L  L L  N+LY  I   L NC  L+ + L NN  +G+ P EI +L+ L++L L+ +  +G  P  SLG +  L   +V +N
Sbjct:   61 CNWKGVTCDAKTKRVIALSLTYHKLRGPLP-PELGKLDQLRLLMLHNNALYQSIPASLGNCTALEGIYLQNNYITGTIPSEIGNLSGLKNLDLSNNNLNGAIP-ASLGQLKRLTKFNVSNN 179          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: Y5020_ARATH (Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana GN=At5g10020 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.173e-11
Identity = 44/120 (36.67%), Postives = 60/120 (50.00%), Query Frame = 1
Query:  193 NFTGITCNSDSSFVQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSFP-EISSLNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDN 549
            ++ GI+C+ ++  +  I L  R L G L F ++  L  L  LSL  NS  G +   L     LQ+LDL +N F G  P  IS L  L HL L+ + F G FP     N+  L SL +  N
Sbjct:   63 DWPGISCDPETGSIIAINLDRRGLSGELKFSTLSGLTRLRNLSLSGNSFSGRVVPSLGGISSLQHLDLSDNGFYGPIPGRISELWSLNHLNLSSNKFEGGFP-SGFRNLQQLRSLDLHKN 181          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.173e-11
Identity = 44/121 (36.36%), Postives = 66/121 (54.55%), Query Frame = 1
Query:  190 CNFTGITCNSDSSFVQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSFP-EISSLNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDN 549
            CN+ G+TC++ +  V  + L+   + G LP D I +L  L  L L  N+LYG I   L NC  L+ + L +N F+G  P E+  L  LQ L ++ +  SG  P  SLG +  L + +V +N
Sbjct:   62 CNWNGVTCDAKTKRVITLNLTYHKIMGPLPPD-IGKLDHLRLLMLHNNALYGAIPTALGNCTALEEIHLQSNYFTGPIPAEMGDLPGLQKLDMSSNTLSGPIP-ASLGQLKKLSNFNVSNN 180          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11
Identity = 42/125 (33.60%), Postives = 66/125 (52.80%), Query Frame = 1
Query:  178 NNHFCNFTGITCNSDSSFVQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSFP-EISSLNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDN 549
            N+ FC++ G+ C++ S  V  + LSN NL G +   ++  L  L  + L  N L G+I  ++ NCV L Y+D   N+  G  P  IS L +L+ L L  +  +G  P  +L  + NL +L +  N
Sbjct:   57 NHDFCSWRGVFCDNVSLNVVSLNLSNLNLGGEIS-SALGDLMNLQSIDLQGNKLGGQIPDEIGNCVSLAYVDFSTNLLFGDIPFSISKLKQLEFLNLKNNQLTGPIP-ATLTQIPNLKTLDLARN 179          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: Y1143_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.412e-11
Identity = 49/149 (32.89%), Postives = 79/149 (53.02%), Query Frame = 1
Query:  214 NSDSSFVQEIELSNRN--------LKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSFPEISSLNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDNPFDPTPFPDQVVKLNKLNWLYLTNCSIDG 636
            +SDS F    +LSN          + G LP   I    +L  L+L  N + G I K++++   L+ L L NN+F+GS P++  L+ LQ L L   G + + P +     +NL+++S+ +N F  +  P+Q+ KLNKL  L L++    G
Sbjct:   95 SSDSLFTVLTKLSNLKTLSLVSLGISGPLPSQIIRLSSSLQSLNLSSNFISGNIPKEISSLKNLRSLVLANNLFNGSVPDLRGLSNLQELNL---GGNKLGPEVVPSLASNLITISLKNNSFG-SKIPEQIKKLNKLQSLDLSSNKFTG 239          
The following BLAST results are available for this feature:
BLAST of CF504274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
Y5694_ARATH2.870e-1231.28Probably inactive leucine-rich repeat receptor-lik... [more]
Y2317_ARATH2.870e-1235.17Probable leucine-rich repeat receptor-like protein... [more]
BRI1_ARATH6.393e-1236.17Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
Y3288_ARATH1.424e-1135.97Probable inactive receptor kinase At3g02880 OS=Ara... [more]
Y4374_ARATH2.429e-1134.93Probable inactive receptor kinase At4g23740 OS=Ara... [more]
FEI2_ARATH2.429e-1134.71LRR receptor-like serine/threonine-protein kinase ... [more]
Y5020_ARATH3.173e-1136.67Probable inactive receptor kinase At5g10020 OS=Ara... [more]
FEI1_ARATH3.173e-1136.36LRR receptor-like serine/threonine-protein kinase ... [more]
ERL2_ARATH4.144e-1133.60LRR receptor-like serine/threonine-protein kinase ... [more]
Y1143_ARATH5.412e-1132.89Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-763 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504274 ID=CF504274; Name=CF504274; organism=Citrus sinensis; type=EST; length=636bp
ATTTAGTATCATCTTTTTCTTTGGCCAGCAGAAATGTCAACCTCTAAGAT
TTCTCTGTGTCTCCTCCTTTGTCTCCCCTTCTTCACCTGTATCAATTCAG
ATGAGCTTCAGATTCTTCTAAATCTCAAAACCTCCCTCAAAGATTCGAAA
TCCAGTATATTCTCTTCCTGGGTATCAAATAATCACTTTTGTAATTTCAC
CGGAATCACTTGTAACTCGGACAGTTCTTTTGTTCAAGAAATCGAGCTTT
CCAATCGAAACCTGAAAGGAACCCTTCCTTTTGACTCAATTTGTCAGCTT
CAGGCATTGCACAAGCTCTCACTTGGCTTCAATTCCTTGTACGGTGAAAT
CTCAAAAGACTTGAACAACTGTGTCAAACTACAGTACTTGGATCTTGGCA
ACAACGTTTTTAGTGGATCGTTTCCGGAAATATCTTCTCTCAACGAATTA
CAGCACCTGTATCTCAACCTCAGCGGATTCTCCGGCGTGTTTCCATGGAT
GTCGCTTGGAAACATGACCAATCTTGTTTCACTCAGCGTTGGCGATAACC
CTTTTGATCCCACCCCGTTTCCCGACCAAGTCGTGAAGCTGAACAAGCTG
AATTGGCTCTATTTAACAAACTGCTCCATTGATGGG
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