CF504285

Overview
NameCF504285
Unique NameCF504285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length390
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12594 contig Csv1_Contig12594:72..460. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.918e-36
Identity = 65/71 (91.55%), Postives = 68/71 (95.77%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQVSDA+LDACL QDP+SKVACETCTKT+MVMVFGEITTKA VDYEKIVRDTCR IGFTSADVGLDA
Sbjct:   17 DKLCDQVSDAILDACLEQDPESKVACETCTKTSMVMVFGEITTKATVDYEKIVRDTCRGIGFTSADVGLDA 87

HSP 2 Score: 34.6538 bits (78), Expect = 1.918e-36
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3 
Query:  129 METFLFTSESVNEGH 173
            METFLFTSESVNEGH
Sbjct:    1 METFLFTSESVNEGH 15
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK_WHEAT (S-adenosylmethionine synthetase OS=Triticum aestivum GN=SAMS PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.498e-36
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQ+SDAVLDACLA+DPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCR IGF S DVGLDA
Sbjct:   20 DKLCDQISDAVLDACLAEDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRGIGFVSNDVGLDA 90

HSP 2 Score: 31.9574 bits (71), Expect = 2.498e-36
Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = 3 
Query:  129 METFLFTSESVNEGH 173
            ++TFLFTSESVNEGH
Sbjct:    4 VDTFLFTSESVNEGH 18
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK_MEDTR (S-adenosylmethionine synthetase OS=Medicago truncatula GN=METK PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.498e-36
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQ+SDAVLDACL QDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCR+IGF S DVGLDA
Sbjct:   18 DKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRTIGFISDDVGLDA 88

HSP 2 Score: 32.7278 bits (73), Expect = 2.498e-36
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 3 
Query:  132 ETFLFTSESVNEGH 173
            ETFLFTSESVNEGH
Sbjct:    3 ETFLFTSESVNEGH 16
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK2_ORYSJ (S-adenosylmethionine synthetase 2 OS=Oryza sativa subsp. japonica GN=SAM2 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.498e-36
Identity = 67/71 (94.37%), Postives = 67/71 (94.37%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGF S DVGLDA
Sbjct:   19 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRGIGFVSDDVGLDA 89

HSP 2 Score: 32.7278 bits (73), Expect = 2.498e-36
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 3 
Query:  132 ETFLFTSESVNEGH 173
            ETFLFTSESVNEGH
Sbjct:    4 ETFLFTSESVNEGH 17
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK1_ARATH (S-adenosylmethionine synthetase 1 OS=Arabidopsis thaliana GN=SAM1 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 2.498e-36
Identity = 65/71 (91.55%), Postives = 67/71 (94.37%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQ+SDAVLDACL QDPDSKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+IGF S DVGLDA
Sbjct:   17 DKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRAIGFVSDDVGLDA 87

HSP 2 Score: 34.6538 bits (78), Expect = 2.498e-36
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3 
Query:  129 METFLFTSESVNEGH 173
            METFLFTSESVNEGH
Sbjct:    1 METFLFTSESVNEGH 15
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK2_SOLTU (S-adenosylmethionine synthetase 2 OS=Solanum tuberosum GN=METK2 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.498e-36
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQVSDA+LDACL QDP+SKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCR IGF SADVGLDA
Sbjct:   17 DKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCREIGFISADVGLDA 87

HSP 2 Score: 32.3426 bits (72), Expect = 2.498e-36
Identity = 14/15 (93.33%), Postives = 14/15 (93.33%), Query Frame = 3 
Query:  129 METFLFTSESVNEGH 173
            METFL TSESVNEGH
Sbjct:    1 METFLLTSESVNEGH 15
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK2_HORVU (S-adenosylmethionine synthetase 2 OS=Hordeum vulgare GN=SAM2 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.254e-36
Identity = 67/71 (94.37%), Postives = 67/71 (94.37%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGF S DVGLDA
Sbjct:   19 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRDIGFISDDVGLDA 89

HSP 2 Score: 32.7278 bits (73), Expect = 3.254e-36
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 3 
Query:  132 ETFLFTSESVNEGH 173
            ETFLFTSESVNEGH
Sbjct:    4 ETFLFTSESVNEGH 17
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK1_HORVU (S-adenosylmethionine synthetase 1 OS=Hordeum vulgare GN=SAM1 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.254e-36
Identity = 67/71 (94.37%), Postives = 67/71 (94.37%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGF S DVGLDA
Sbjct:   19 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRDIGFISDDVGLDA 89

HSP 2 Score: 32.7278 bits (73), Expect = 3.254e-36
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 3 
Query:  132 ETFLFTSESVNEGH 173
            ETFLFTSESVNEGH
Sbjct:    4 ETFLFTSESVNEGH 17
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 4.239e-36
Identity = 65/71 (91.55%), Postives = 67/71 (94.37%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQ+SDAVLDACL QDPDSKVACETCTKTNMVMVFGEITTK N+DYEKIVRDTCR IGFTS DVGLDA
Sbjct:   18 DKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKGNIDYEKIVRDTCRDIGFTSEDVGLDA 88

HSP 2 Score: 31.5722 bits (70), Expect = 4.239e-36
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 3 
Query:  132 ETFLFTSESVNEGH 173
            +TFLFTSESVNEGH
Sbjct:    3 DTFLFTSESVNEGH 16
[Close]
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK3_PETHY (S-adenosylmethionine synthetase 3 OS=Petunia hybrida GN=SAM3 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.239e-36
Identity = 64/71 (90.14%), Postives = 68/71 (95.77%), Query Frame = 1 
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DKLCDQ+SDAVLDACL QDP+SKVACETCTKTN+VMVFGEITTKANVDYEKIVRDTCR+IGF S DVGLDA
Sbjct:   17 DKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRDTCRNIGFISDDVGLDA 87

HSP 2 Score: 34.6538 bits (78), Expect = 4.239e-36
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 3 
Query:  129 METFLFTSESVNEGH 173
            METFLFTSESVNEGH
Sbjct:    1 METFLFTSESVNEGH 15
The following BLAST results are available for this feature:
BLAST of CF504285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_PETHY1.918e-3691.55S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK_WHEAT2.498e-3692.96S-adenosylmethionine synthetase OS=Triticum aestiv... [more]
METK_MEDTR2.498e-3692.96S-adenosylmethionine synthetase OS=Medicago trunca... [more]
METK2_ORYSJ2.498e-3694.37S-adenosylmethionine synthetase 2 OS=Oryza sativa ... [more]
METK1_ARATH2.498e-3691.55S-adenosylmethionine synthetase 1 OS=Arabidopsis t... [more]
METK2_SOLTU2.498e-3692.96S-adenosylmethionine synthetase 2 OS=Solanum tuber... [more]
METK2_HORVU3.254e-3694.37S-adenosylmethionine synthetase 2 OS=Hordeum vulga... [more]
METK1_HORVU3.254e-3694.37S-adenosylmethionine synthetase 1 OS=Hordeum vulga... [more]
METK_MUSAC4.239e-3691.55S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK3_PETHY4.239e-3690.14S-adenosylmethionine synthetase 3 OS=Petunia hybri... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-774 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504285 ID=CF504285; Name=CF504285; organism=Citrus sinensis; type=EST; length=390bp
CGTCTTTCTCTCGTTCTTCTGGGTACTTACCATTTTCGTATATCACCACC
TTCAATTCCATTTGTACTCGCACCACGGCCTCCTGCAAAGCGAAAGCTGC
AGCTTCAGGTTAAATCAAATTAAAGAAAATGGAAACATTTCTTTTCACAT
CAGAATCAGTGAACGAGGGTCACCTCGGACAAGCTGTGTGACCAAGTTTC
GGACGCAGTACTGGACGCGTGTTTGGCTCAGGATCCTGACAGCAAAGTTG
CTTGTGAAACATGCACAAAGACCAACATGGTCATGGTTTTTGGAGAAATT
ACAACCAAGGCCAATGTGGATTACGAGAAAATCGTGCGTGATACATGCAG
ATCGATTGGGTTCACATCGGCCGATGTGGGGCTTGATGCT
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