CF504285

Overview
NameCF504285
Unique NameCF504285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length390
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK_STRP2 (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=metK PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.329e-17
Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DK+ DQ+SDA+LDA LA+DP++ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+T+ + G  A
Sbjct:   18 DKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSA 88          

HSP 2 Score: 25.0238 bits (53), Expect = 9.329e-17
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  132 ETFLFTSESVNEGH 173
            E  LFTSESV+EGH
Sbjct:    3 ERKLFTSESVSEGH 16          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK_PSEE4 (S-adenosylmethionine synthetase OS=Pseudomonas entomophila (strain L48) GN=metK PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.329e-17
Identity = 38/70 (54.29%), Postives = 51/70 (72.86%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLD 387
            DK+ DQ+SDAVLDA +AQD  ++VACET  KT + ++ GE+TT A VD E++VR     IG+ S+DVG D
Sbjct:   18 DKIADQISDAVLDAIIAQDKYARVACETLVKTGVAIIAGEVTTSAWVDLEELVRKVIIDIGYNSSDVGFD 87          

HSP 2 Score: 25.0238 bits (53), Expect = 9.329e-17
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  132 ETFLFTSESVNEGH 173
            E  LFTSESV+EGH
Sbjct:    3 EYSLFTSESVSEGH 16          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK_HAEDU (S-adenosylmethionine synthetase OS=Haemophilus ducreyi GN=metK PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.334e-17
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DK+ DQ+SDAVLD  L QDP ++VACET  KT M +V GEITT A VD E + R     IG++ +D+G DA
Sbjct:   22 DKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVIYDIGYSHSDMGFDA 92          

HSP 2 Score: 24.6386 bits (52), Expect = 9.334e-17
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 3
Query:  141 LFTSESVNEGH 173
            LFTSESV+EGH
Sbjct:   10 LFTSESVSEGH 20          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK_PASMU (S-adenosylmethionine synthetase OS=Pasteurella multocida GN=metK PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 9.336e-17
Identity = 38/70 (54.29%), Postives = 47/70 (67.14%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLD 387
            DK+ DQ+SDAVLD  L QDP ++VACET  KT M +V GEITT A VD E + R     IG+  +D+G D
Sbjct:   17 DKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYKHSDMGFD 86          

HSP 2 Score: 27.335 bits (59), Expect = 9.336e-17
Identity = 11/15 (73.33%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  129 METFLFTSESVNEGH 173
            M  +LFTSESV+EGH
Sbjct:    1 MSRYLFTSESVSEGH 15          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK_BUCAP (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=metK PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 9.338e-17
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DK+ DQ+SDA+LD  + QD  ++VACET  KT MV++ GEITT A VD E+I R+T  +IG+ +++ G DA
Sbjct:   17 DKIADQISDALLDEIIKQDLKARVACETYVKTGMVLIGGEITTTAWVDVEEITRNTINNIGYINSETGFDA 87          

HSP 2 Score: 26.9498 bits (58), Expect = 9.338e-17
Identity = 11/15 (73.33%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  129 METFLFTSESVNEGH 173
            M  +LFTSESV+EGH
Sbjct:    1 MTEYLFTSESVSEGH 15          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK_BAUCH (S-adenosylmethionine synthetase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=metK PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.188e-16
Identity = 43/86 (50.00%), Postives = 61/86 (70.93%), Query Frame = 1
Query:  133 KHFFSHQNQ*TRVTSDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            KH F+ ++  +    DK+ DQ+SD VLDA LAQD  ++VACET  KT MV+V GEITT A +D E++ R+T R IG+T++++  DA
Sbjct:    3 KHLFTSESV-SEGHPDKIADQISDTVLDAILAQDLKARVACETYVKTGMVLVGGEITTNAWIDIEELTRNTIRDIGYTNSEMKFDA 87          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK_STRT1 (S-adenosylmethionine synthetase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=metK PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.213e-16
Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDA 390
            DK+ DQ+SDA+LDA LA+DPD+ VA ET   T  V +FGE++T A VD  ++VRDT   IG+ +A+ G  A
Sbjct:   18 DKIADQISDAILDAILAEDPDAHVAAETAVYTGSVHIFGEVSTTAYVDINRVVRDTIAEIGYNNAEYGFAA 88          

HSP 2 Score: 25.0238 bits (53), Expect = 1.213e-16
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  132 ETFLFTSESVNEGH 173
            E  LFTSESV+EGH
Sbjct:    3 ERKLFTSESVSEGH 16          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK_MARAV (S-adenosylmethionine synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metK PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.213e-16
Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLD 387
            DKL DQ+SDAVLDA L  DP ++VACET  KT + +V GEITT A VD E +VR   + I +TS++VG D
Sbjct:   18 DKLADQISDAVLDAILTDDPHARVACETMVKTGVAIVGGEITTSAWVDLEDLVRGVIKDIDYTSSEVGYD 87          

HSP 2 Score: 23.8682 bits (50), Expect = 1.213e-16
Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 3
Query:  141 LFTSESVNEGH 173
            +FTSESV+EGH
Sbjct:    6 IFTSESVSEGH 16          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK_BURVG (S-adenosylmethionine synthetase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=metK PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.213e-16
Identity = 38/70 (54.29%), Postives = 51/70 (72.86%), Query Frame = 1
Query:  178 DKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLD 387
            DK+ DQ+SDA+LDA L QD  S+VA ET   T +V++ GEITT AN+DY +I RDT + IG+ + D G+D
Sbjct:   18 DKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGID 87          

HSP 2 Score: 24.2534 bits (51), Expect = 1.213e-16
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  138 FLFTSESVNEGH 173
            + FTSESV+EGH
Sbjct:    5 YFFTSESVSEGH 16          
BLAST of CF504285 vs. ExPASy Swiss-Prot
Match: METK_DESDG (S-adenosylmethionine synthetase OS=Desulfovibrio desulfuricans (strain G20) GN=metK PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.552e-16
Identity = 41/87 (47.13%), Postives = 58/87 (66.67%), Query Frame = 1
Query:  127 KWKHFFSHQNQ*TRVTSDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLD 387
            K K+ F+ ++  T    DK+ DQ+SDAVLD  L QDPDS+VACET   T M ++ GEITT+   D  ++VRDT + IG+ ++ +G D
Sbjct:    5 KGKYHFTSESV-TEGHPDKVADQISDAVLDVLLEQDPDSRVACETMVTTGMAIIAGEITTRGYADLPQVVRDTIKEIGYNNSSMGFD 90          
The following BLAST results are available for this feature:
BLAST of CF504285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STRP29.329e-1753.52S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_PSEE49.329e-1754.29S-adenosylmethionine synthetase OS=Pseudomonas ent... [more]
METK_HAEDU9.334e-1754.93S-adenosylmethionine synthetase OS=Haemophilus duc... [more]
METK_PASMU9.336e-1754.29S-adenosylmethionine synthetase OS=Pasteurella mul... [more]
METK_BUCAP9.338e-1752.11S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BAUCH1.188e-1650.00S-adenosylmethionine synthetase OS=Baumannia cicad... [more]
METK_STRT11.213e-1652.11S-adenosylmethionine synthetase OS=Streptococcus t... [more]
METK_MARAV1.213e-1657.14S-adenosylmethionine synthetase OS=Marinobacter aq... [more]
METK_BURVG1.213e-1654.29S-adenosylmethionine synthetase OS=Burkholderia vi... [more]
METK_DESDG1.552e-1647.13S-adenosylmethionine synthetase OS=Desulfovibrio d... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-774 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504285 ID=CF504285; Name=CF504285; organism=Citrus sinensis; type=EST; length=390bp
CGTCTTTCTCTCGTTCTTCTGGGTACTTACCATTTTCGTATATCACCACC
TTCAATTCCATTTGTACTCGCACCACGGCCTCCTGCAAAGCGAAAGCTGC
AGCTTCAGGTTAAATCAAATTAAAGAAAATGGAAACATTTCTTTTCACAT
CAGAATCAGTGAACGAGGGTCACCTCGGACAAGCTGTGTGACCAAGTTTC
GGACGCAGTACTGGACGCGTGTTTGGCTCAGGATCCTGACAGCAAAGTTG
CTTGTGAAACATGCACAAAGACCAACATGGTCATGGTTTTTGGAGAAATT
ACAACCAAGGCCAATGTGGATTACGAGAAAATCGTGCGTGATACATGCAG
ATCGATTGGGTTCACATCGGCCGATGTGGGGCTTGATGCT
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