CF504318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_SULSO (Probable lipoyl synthase OS=Sulfolobus solfataricus GN=lipA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.360e-20 Identity = 49/91 (53.85%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MI+G CTRGCRFC V + VAEA+ LDYVVITSVDRDDL+D G+ HFA V+ +KEL P +++E L PDFRG Sbjct: 48 ATFMIMGSICTRGCRFCYVLKGKPSPLDDEEPK-RVAEAVKEMELDYVVITSVDRDDLSDGGAQHFANVVKTVKELNPGIIVEVLTPDFRG 137
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_PYRAR (Probable lipoyl synthase OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=lipA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.360e-20 Identity = 46/91 (50.55%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MILG+ CTR CRFC+V+T VAEA+ GL YVV+TSVDRDDL D G+ +A +R+++ L P L+E L PDFRG Sbjct: 51 ATFMILGEVCTRACRFCSVRTGNPRGYVDLDEPRRVAEAVRRLGLRYVVVTSVDRDDLPDGGAFQYASAIREIRRLAPGALVEVLTPDFRG 141
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_LEGPL (Lipoyl synthase OS=Legionella pneumophila (strain Lens) GN=lipA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.360e-20 Identity = 45/91 (49.45%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 ATIM++G CTR CRFC+V T N AE +A LDYVV+TSV+RDDL D G+ H+A+T+R +K+ P +EAL PDF+G Sbjct: 89 ATIMLMGAVCTRACRFCSVDTGNPHGWLDAEEPENTAETVALMNLDYVVLTSVNRDDLPDGGANHYAKTIRAIKKRSPRTKVEALTPDFQG 179
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_LEGPH (Lipoyl synthase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=lipA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.360e-20 Identity = 45/91 (49.45%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 ATIM++G CTR CRFC+V T N AE +A LDYVV+TSV+RDDL D G+ H+A+T+R +K+ P +EAL PDF+G Sbjct: 89 ATIMLMGAVCTRACRFCSVDTGNPHGWLDAEEPENTAETVALMNLDYVVLTSVNRDDLPDGGANHYAKTIRAIKKRSPRTKVEALTPDFQG 179
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_LEGPC (Lipoyl synthase OS=Legionella pneumophila (strain Corby) GN=lipA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.360e-20 Identity = 45/91 (49.45%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 ATIM++G CTR CRFC+V T N AE +A LDYVV+TSV+RDDL D G+ H+A+T+R +K+ P +EAL PDF+G Sbjct: 89 ATIMLMGAVCTRACRFCSVDTGNPHGWLDAEEPENTAETVALMNLDYVVLTSVNRDDLPDGGANHYAKTIRAIKKRSPRTKVEALTPDFQG 179
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_LEGPA (Lipoyl synthase OS=Legionella pneumophila (strain Paris) GN=lipA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.360e-20 Identity = 45/91 (49.45%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 ATIM++G CTR CRFC+V T N AE +A LDYVV+TSV+RDDL D G+ H+A+T+R +K+ P +EAL PDF+G Sbjct: 89 ATIMLMGAVCTRACRFCSVDTGNPHGWLDAEEPENTAETVALMNLDYVVLTSVNRDDLPDGGANHYAKTIRAIKKRSPRTKVEALTPDFQG 179
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_BEII9 (Lipoyl synthase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=lipA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.360e-20 Identity = 48/89 (53.93%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT MI+GDTCTR C FCNVKT ++A+A+ GL +VVITSVDRDDLAD G+ HFAQ +R ++E P IE L PDF Sbjct: 83 ATFMIMGDTCTRACAFCNVKTG-LPNGLDPHEPAHIADAVQKLGLSHVVITSVDRDDLADGGAEHFAQVIRAIREASPKTTIEVLTPDF 170
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_BACFN (Lipoyl synthase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=lipA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.320e-20 Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MI GD CTR C+FCN +T R T+VAE+IA L + VITSVDRDDL D G+ H+AQT+R++K L P E L+PDF+G Sbjct: 56 ATFMIAGDICTRSCKFCNTQTGRPLPLDPDEP-THVAESIALMKLSHAVITSVDRDDLPDLGAAHWAQTIREIKRLNPETTTEVLIPDFQG 145
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_RHOP5 (Lipoyl synthase OS=Rhodopseudomonas palustris (strain BisA53) GN=lipA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.958e-20 Identity = 50/89 (56.18%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT MI+GDTCTR C FCNVKT NVAEA A GL ++VITSVDRDDLAD G+ H A T+R ++E P+ IE L PDF Sbjct: 78 ATFMIMGDTCTRACAFCNVKTGMPAALDGAEP-ANVAEATAKLGLAHLVITSVDRDDLADGGAAHIAATIRAVRERCPSTTIEVLTPDF 165
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_HAHCH (Lipoyl synthase OS=Hahella chejuensis (strain KCTC 2396) GN=lipA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.958e-20 Identity = 49/91 (53.85%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MI+GD CTR C FC+V R T++A+AIA L YVVITSVDRDDL D G+GHFA+ + + ++ PN+ IE LVPDFRG Sbjct: 96 ATFMIMGDICTRRCPFCDVAHGRPNALDENEP-THLAQAIAEMNLKYVVITSVDRDDLRDGGAGHFAKCISESRKYSPNLKIEVLVPDFRG 185 The following BLAST results are available for this feature:
BLAST of CF504318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504318 ID=CF504318; Name=CF504318; organism=Citrus sinensis; type=EST; length=275bpback to top |