CF504318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_RHORT (Lipoyl synthase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=lipA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.350e-19 Identity = 45/90 (50.00%), Postives = 60/90 (66.67%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFR 270 AT MILGD CTR C FCNV+T + N+A+++ + GL +VVITSVDRDDLAD G+GHF + + +++ P+ IE L PDFR Sbjct: 70 ATFMILGDICTRACAFCNVRTGKPGHVDDQEP-VNLADSVVAMGLKHVVITSVDRDDLADGGAGHFHRCITEVRSRAPSCSIEVLTPDFR 158
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_METNO (Lipoyl synthase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=lipA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.350e-19 Identity = 46/89 (51.69%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT MI+GDTCTR C FCNV+T VA+A+A GL +VVITSVDRDDL D G+GHFA + +++ P IE L PDF Sbjct: 77 ATFMIMGDTCTRACAFCNVRTG-LPQGLDGDEPARVADAVARLGLSHVVITSVDRDDLRDGGAGHFAAVIGAIRQASPGTTIEVLTPDF 164
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_DELAS (Lipoyl synthase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=lipA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.350e-19 Identity = 49/91 (53.85%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MI+GD CTR C FC+V R N+A+ IA L YVVITSVDRDDL D GSGHF + ++ ++EL P IE LVPDFRG Sbjct: 91 ATFMIMGDKCTRRCPFCDVGHGRPDPLDTNEPL-NLAKTIAELRLKYVVITSVDRDDLRDGGSGHFVECIKNIRELSPLTQIEILVPDFRG 180
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_XANP2 (Lipoyl synthase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=lipA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.376e-19 Identity = 46/89 (51.69%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT MI+GDTCTR C FCNV+T V +A+A GL +VVITSVDRDDLAD G+ HFA+T+ +++ P IE L PDF Sbjct: 74 ATFMIMGDTCTRACAFCNVRTGMPEALDQGEPQ-KVGDAVAKLGLSHVVITSVDRDDLADGGAEHFARTIAAIRKASPGTTIEILTPDF 161
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_SILST (Lipoyl synthase OS=Silicibacter sp. (strain TM1040) GN=lipA PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 4.376e-19 Identity = 46/89 (51.69%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT+MI+G+ CTRGC FCN+ T R VA A+ GL++VVITSVDRDDL D G+ HFAQT+R ++ P IE L PDF Sbjct: 72 ATMMIMGEICTRGCTFCNIATGRPDTLDAFEPG-RVAHAVQKLGLNHVVITSVDRDDLEDGGADHFAQTIRAVRHRSPQTTIEILTPDF 159
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_PASMU (Lipoyl synthase OS=Pasteurella multocida GN=lipA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.376e-19 Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MILG CTR C FC+V + +AE I L YVVITSVDRDDL D+G+GHFA+ V+++++L PN+ IE LVPDFRG Sbjct: 84 ATFMILGAICTRRCPFCDVAHGKPLPPDPEEPR-KLAETIQDMKLRYVVITSVDRDDLPDRGAGHFAECVKEIRQLNPNIKIEILVPDFRG 173
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_DIAST (Lipoyl synthase OS=Diaphorobacter sp. (strain TPSY) GN=lipA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.376e-19 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MI+GD CTR C FC+V R N+A+ IA+ L YVVITSVDRDDL D GSGHF + +++ +EL P+ IE L PDFRG Sbjct: 91 ATFMIMGDKCTRRCPFCDVGHGRPDPLDKDEPL-NLAKTIAALRLKYVVITSVDRDDLRDGGSGHFVECIQRTRELSPSTQIEILTPDFRG 180
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_ACISJ (Lipoyl synthase OS=Acidovorax sp. (strain JS42) GN=lipA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.376e-19 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MI+GD CTR C FC+V R N+A+ IA+ L YVVITSVDRDDL D GSGHF + +++ +EL P+ IE L PDFRG Sbjct: 91 ATFMIMGDKCTRRCPFCDVGHGRPDPLDKDEPL-NLAKTIAALRLKYVVITSVDRDDLRDGGSGHFVECIQRTRELSPSTQIEILTPDFRG 180
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_RICPR (Lipoyl synthase OS=Rickettsia prowazekii GN=lipA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19 Identity = 46/89 (51.69%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDF 267 AT+MILG CTR CRFCNVKT R +AEA+ L +VVITSVDRDDL D G+ HFA+ + +++ PN IE L PDF Sbjct: 54 ATVMILGAVCTRACRFCNVKTGRPDLLDPHEPR-RLAEAVQKLNLQHVVITSVDRDDLEDGGASHFAECINEIRRSSPNTTIEILTPDF 141
BLAST of CF504318 vs. ExPASy Swiss-Prot
Match: LIPA_PSEU5 (Lipoyl synthase OS=Pseudomonas stutzeri (strain A1501) GN=lipA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.464e-19 Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 1 ATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRG 273 AT MI+GD CTR C FC+V R N+A+AIA L YVVITSVDRDDL D G+ HFA +R++++L P++ +E LVPD+RG Sbjct: 89 ATFMIMGDICTRRCPFCDVGHGRPNALDPDEPK-NLAQAIADMRLKYVVITSVDRDDLRDGGAQHFADCLREIRKLSPSIQLETLVPDYRG 178 The following BLAST results are available for this feature:
BLAST of CF504318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504318 ID=CF504318; Name=CF504318; organism=Citrus sinensis; type=EST; length=275bpback to top |