CF504319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: SAR1_NEUCR (Small COPII coat GTPase sar-1 OS=Neurospora crassa GN=sar-1 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.558e-16 Identity = 39/103 (37.86%), Postives = 63/103 (61.17%), Query Frame = 3 Query: 81 LPRKRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389 L K ++L +GLD AGKTT+L+ LK + PT+ E + N+ FT +D+GG + R LW+ YF G++F+VD+ D +R+ EA+ E+ +L+ +E Sbjct: 16 LLNKHGKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELSVGNVKFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHERLPEAKAEIDALLSMEE 118
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: SAR1A_DICDI (GTP-binding protein Sar1A OS=Dictyostelium discoideum GN=sarA PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.034e-16 Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 3 Query: 81 LPRKRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389 L K +IL +GLD AGKTT+L LK G + + +PT E + NI F +D+GG + R LW+ Y+ + +++++DS+ +DR VE++ EL +L+ DE Sbjct: 16 LYNKNAKILFLGLDNAGKTTLLGVLKDGRLSSYLPTFHPTSEELAMGNIRFKAFDLGGHESARRLWKDYYPSVDAIVYLIDSSAQDRFVESKKELDSLLSSDE 118
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: SAR1_TRIRE (Small COPII coat GTPase sar1 OS=Trichoderma reesei GN=sar1 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.657e-16 Identity = 40/107 (37.38%), Postives = 64/107 (59.81%), Query Frame = 3 Query: 69 SAGSLPRKRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389 S+ L K ++L +GLD AGKTT+L+ LK + PT+ E + N+ F +D+GG + R +WR YF + G++F+VD+ D +R EA+ EL +L+ +E Sbjct: 12 SSLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFNTFDLGGHQQARRIWRDYFPDVNGVVFLVDAKDHERFPEAKAELDALLSMEE 118
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARL6_CAEBR (ADP-ribosylation factor-like protein 6 OS=Caenorhabditis briggsae GN=arl-6 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.657e-16 Identity = 47/116 (40.52%), Postives = 71/116 (61.21%), Query Frame = 3 Query: 48 G*LSQSCSAGSLPRKRCRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389 G LS + + +K I++VGLD +GKTTIL +LK E + +PT+G V +N+SF +D+ GQ K R W YF ++QG+IFV+DS+DR R+ +DEL +L+ + Sbjct: 2 GFLSSLSNLFGMGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRVRMELLKDELWLVLDHKD 117
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: SAR1_CANGA (Small COPII coat GTPase SAR1 OS=Candida glabrata GN=SAR1 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.470e-16 Identity = 44/100 (44.00%), Postives = 59/100 (59.00%), Query Frame = 3 Query: 90 KRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389 K ++L +GLD AGKTT+L+ LK + T PT E + NI FT +D+GG + R LW+ YF G++F+VDS D DR EAR EL + N E Sbjct: 21 KHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHVQARRLWKDYFPEVNGIVFLVDSADPDRFDEARVELDALFNITE 120
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARL8_DICDI (ADP-ribosylation factor-like protein 8 OS=Dictyostelium discoideum GN=arl8 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.532e-16 Identity = 35/100 (35.00%), Postives = 63/100 (63.00%), Query Frame = 3 Query: 87 RKRCRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNE 383 ++ + +VGL +GKTT++ + G + TIPTIGFN++ V N++ +WD+GGQ + R +W Y + ++FVVDS DR++ +++ L ++N+ Sbjct: 17 KQEMELTLVGLQGSGKTTLVNVISNGGFIEDTIPTIGFNMKKVTKGNVTIKLWDIGGQPRFRSMWERYCRGVNAIVFVVDSADREKFEQSKQALQDLINK 116
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARL6_CAEEL (ADP-ribosylation factor-like protein 6 OS=Caenorhabditis elegans GN=arl-6 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.532e-16 Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 3 Query: 48 G*LSQSCSAGSLPRKRCRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389 G S S L +K I++VGLD +GKTTIL +LK E + +PT+G V +N+SF +D+ GQ K R W YF ++QG+IFV+DS+DR R+ +DEL ++ + Sbjct: 2 GFFSSLSSLFGLGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRLRMELLKDELMMVMEHKD 117
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARL3_PONAB (ADP-ribosylation factor-like protein 3 OS=Pongo abelii GN=ARL3 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.919e-16 Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 78 SLPRKRCRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNT 299 S P + RIL++GLD AGKTT+L +L +I PT GFN+++V+ + VWD+GGQ KIRP W++YF+NT Sbjct: 12 SAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYFENT 85
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARL8B_RAT (ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus GN=Arl8b PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.730e-16 Identity = 33/102 (32.35%), Postives = 64/102 (62.75%), Query Frame = 3 Query: 87 RKRCRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389 ++ + +VGL +GKTT + + G+ IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++++D+ DR++I +R+ELH +L++ + Sbjct: 18 KEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQ 119
BLAST of CF504319 vs. ExPASy Swiss-Prot
Match: ARL8B_MOUSE (ADP-ribosylation factor-like protein 8B OS=Mus musculus GN=Arl8b PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.730e-16 Identity = 33/102 (32.35%), Postives = 64/102 (62.75%), Query Frame = 3 Query: 87 RKRCRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDE 389 ++ + +VGL +GKTT + + G+ IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++++D+ DR++I +R+ELH +L++ + Sbjct: 18 KEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQ 119 The following BLAST results are available for this feature:
BLAST of CF504319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 217
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504319 ID=CF504319; Name=CF504319; organism=Citrus sinensis; type=EST; length=389bpback to top |