CF504355

Overview
NameCF504355
Unique NameCF504355
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length316
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF22_ARATH (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF022 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.184e-14
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 2
Query:  155 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGR 304
            Y+G+R+RKWGK+VSEIR P  + RIWLGSY+TAE AA A+DAA   LRGR
Sbjct:   20 YRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGR 69          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF20_ARATH (Ethylene-responsive transcription factor ERF020 OS=Arabidopsis thaliana GN=ERF020 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.464e-14
Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 2
Query:  137 ERCDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSA 310
            E   S+YKG+R+RKWGK+VSEIR+P +R R+WLGS+ TAE AA A D A +CL   S+
Sbjct:    8 ETDQSKYKGIRRRKWGKWVSEIRVPGTRQRLWLGSFSTAEGAAVAHDVAFYCLHRPSS 65          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF19_ARATH (Ethylene-responsive transcription factor ERF019 OS=Arabidopsis thaliana GN=ERF019 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.464e-14
Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = 2
Query:  149 SRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCL 295
            S+YKG+R+RKWGK+VSEIR+P +R R+WLGS+ TAE AA A D A FCL
Sbjct:   12 SKYKGIRRRKWGKWVSEIRVPGTRDRLWLGSFSTAEGAAVAHDVAFFCL 60          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF61_ARATH (Ethylene-responsive transcription factor ERF061 OS=Arabidopsis thaliana GN=ERF061 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.320e-14
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = 2
Query:  155 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            Y+GVR+R WGK+V+EIRLP +R R+WLG+YDTAE AA A+D A + LRG  A+
Sbjct:  136 YRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYAR 188          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF58_ARATH (Ethylene-responsive transcription factor ERF058 OS=Arabidopsis thaliana GN=ERF058 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.217e-13
Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = 2
Query:   44 VNSIQHHSSKSRIPIT*NPLKMVKHVVEKPAERCDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            ++S  HH S   +      +K       KP +     Y+GVR+R WGK+V+EIRLP +R R+WLG++DTAE+AA A+D A + LRG  A+
Sbjct:   55 LHSFSHHLSPKPVS-----MKQTGTSAAKPTKL----YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFAR 135          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF62_ARATH (Ethylene-responsive transcription factor ERF062 OS=Arabidopsis thaliana GN=ERF062 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.076e-13
Identity = 31/52 (59.62%), Postives = 43/52 (82.69%), Query Frame = 2
Query:  155 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSA 310
            Y+GVR+R WGK+V+EIRLP +R R+WLG+++TAE+AA A+D A + LRG  A
Sbjct:  232 YRGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDTAAYILRGEFA 283          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: RAP24_ARATH (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.712e-13
Identity = 32/53 (60.38%), Postives = 44/53 (83.02%), Query Frame = 2
Query:  155 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            Y+GVR+R WGK+V+EIRLP +R R+WLG++DTAE+AA A+D A + LRG  A+
Sbjct:  152 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFAR 204          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.712e-13
Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 2
Query:  152 RYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            RY+GVRKR WG+Y +EIR P  + R+WLG++DTAE+AARA+D A    RG  AK
Sbjct:   24 RYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAK 77          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.542e-13
Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 2
Query:  137 ERCDSR---YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            E+ +SR   Y+GVR+R WGK+ +EIR PN  AR+WLG++DTAE+AA A+D A F  RG  AK
Sbjct:   61 EKSNSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAK 122          
BLAST of CF504355 vs. ExPASy Swiss-Prot
Match: ERF53_ARATH (Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana GN=ERF053 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.626e-13
Identity = 31/53 (58.49%), Postives = 43/53 (81.13%), Query Frame = 2
Query:  155 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAK 313
            Y+GVR+R WGK+V+EIR P +R R+WLG++DTAE+AA A+D   F LRG +A+
Sbjct:  187 YRGVRQRHWGKWVAEIRKPRNRTRLWLGTFDTAEEAAMAYDREAFKLRGETAR 239          
The following BLAST results are available for this feature:
BLAST of CF504355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
ERF22_ARATH4.184e-1468.00Ethylene-responsive transcription factor ERF022 OS... [more]
ERF20_ARATH5.464e-1458.62Ethylene-responsive transcription factor ERF020 OS... [more]
ERF19_ARATH5.464e-1467.35Ethylene-responsive transcription factor ERF019 OS... [more]
ERF61_ARATH9.320e-1462.26Ethylene-responsive transcription factor ERF061 OS... [more]
ERF58_ARATH1.217e-1343.33Ethylene-responsive transcription factor ERF058 OS... [more]
ERF62_ARATH2.076e-1359.62Ethylene-responsive transcription factor ERF062 OS... [more]
RAP24_ARATH2.712e-1360.38Ethylene-responsive transcription factor RAP2-4 OS... [more]
ERF78_ARATH2.712e-1359.26Ethylene-responsive transcription factor 4 OS=Arab... [more]
EF112_ARATH3.542e-1356.45Ethylene-responsive transcription factor ERF112 OS... [more]
ERF53_ARATH4.626e-1358.49Ethylene-responsive transcription factor ERF053 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-844 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-17_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504355 ID=CF504355; Name=CF504355; organism=Citrus sinensis; type=EST; length=316bp
GGAATACAAGAATCATCATCCAAATCACACTCAAAAGTTCCGAGTCAACT
CGATACAGCACCACTCGTCTAAATCAAGAATACCCATAACCTGAAACCCT
TTAAAAATGGTGAAGCACGTAGTCGAAAAGCCTGCTGAGAGATGTGACTC
TCGTTACAAGGGTGTCCGAAAGCGAAAGTGGGGGAAATATGTGTCTGAAA
TCAGACTACCCAACAGCCGTGCCCGTATCTGGCTGGGCTCCTACGACACA
GCAGAAAAAGCAGCGCGTGCTTTCGACGCTGCTTTGTTTTGCTTACGTGG
CCGATCAGCCAAGTTT
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