CF504382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: STX1A_RAT (Syntaxin-1A OS=Rattus norvegicus GN=Stx1a PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.072e-12 Identity = 39/141 (27.66%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 27 LRKKLKDSMESFNELRQRISSEYRDTVQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTAREVSAK 449 L +K + M +N + + +QR+ +TG + L+ ++ +G F I + + ++EI+ RH + LE +++ELH +F+DMA+LV++QGE +D IE V+ A YV + A + +K Sbjct: 123 LSRKFVEVMSEYNATQSDYRERCKGRIQRQL-EITGRTTTSEELEDMLESGNPAIFASGIIMDSSISK--QALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVKYQSK 260
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: STX1A_PONAB (Syntaxin-1A OS=Pongo abelii GN=STX1A PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.072e-12 Identity = 39/141 (27.66%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 27 LRKKLKDSMESFNELRQRISSEYRDTVQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTAREVSAK 449 L +K + M +N + + +QR+ +TG + L+ ++ +G F I + + ++EI+ RH + LE +++ELH +F+DMA+LV++QGE +D IE V+ A YV + A + +K Sbjct: 123 LSRKFVEVMSEYNATQSDYRERCKGRIQRQL-EITGRTTTSEELEDMLESGNPAIFASGIIMDSSISK--QALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVKYQSK 260
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: STX1A_HUMAN (Syntaxin-1A OS=Homo sapiens GN=STX1A PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.072e-12 Identity = 39/141 (27.66%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 27 LRKKLKDSMESFNELRQRISSEYRDTVQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTAREVSAK 449 L +K + M +N + + +QR+ +TG + L+ ++ +G F I + + ++EI+ RH + LE +++ELH +F+DMA+LV++QGE +D IE V+ A YV + A + +K Sbjct: 123 LSRKFVEVMSEYNATQSDYRERCKGRIQRQL-EITGRTTTSEELEDMLESGNPAIFASGIIMDSSISK--QALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVKYQSK 260
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: STX1A_CAEEL (Syntaxin-1A homolog OS=Caenorhabditis elegans GN=unc-64 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.072e-12 Identity = 36/125 (28.80%), Postives = 71/125 (56.80%), Query Frame = 3 Query: 27 LRKKLKDSMESFNELRQRISSEYRDTVQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYV 401 L ++ + M +N+ + + +QR+ + G+ ++ L+ +I +G F Q I + + + T+ +I+ RH+ + LE +++ELH +F+DMA+LV++QGE +D IE V+ A +V Sbjct: 124 LSRRFVEVMTDYNKTQTDYRERCKGRIQRQL-DIAGKQVGDEDLEEMIESGNPGVFTQGIITDTQQAK--QTLADIEARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVEHAKEFV 245
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: STX1A_CAEBR (Syntaxin-1A OS=Caenorhabditis briggsae GN=unc-64 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.072e-12 Identity = 36/125 (28.80%), Postives = 71/125 (56.80%), Query Frame = 3 Query: 27 LRKKLKDSMESFNELRQRISSEYRDTVQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYV 401 L ++ + M +N+ + + +QR+ + G+ ++ L+ +I +G F Q I + + + T+ +I+ RH+ + LE +++ELH +F+DMA+LV++QGE +D IE V+ A +V Sbjct: 126 LSRRFVEVMTDYNKTQTDYRERCKGRIQRQL-DIAGKQVGDEDLEEMIESGNPGVFTQGIITDTQQAK--QTLADIEARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVEHAKEFV 247
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: STX1A_MOUSE (Syntaxin-1A OS=Mus musculus GN=Stx1a PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 6.625e-12 Identity = 39/141 (27.66%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 27 LRKKLKDSMESFNELRQRISSEYRDTVQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTAREVSAK 449 L +K + M +N + + +QR+ +TG + L+ ++ +G F I + + ++EI+ RH + LE +++ELH +F+DMA+LV++QGE +D IE V+ A YV + A + +K Sbjct: 123 LSRKFVEVMSEYNATQSDYRERCKGRIQRQL-EITGRTTTSEELEDMLESGNPAIFASGIIMDSSISK--QALSEIETRHSEIIKLETSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVKYQSK 260
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: STX4_HUMAN (Syntaxin-4 OS=Homo sapiens GN=STX4 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 38/130 (29.23%), Postives = 71/130 (54.62%), Query Frame = 3 Query: 81 ISSEYRDT----VQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTAREVSAKYPK 458 + SEYR+ ++R+ ++ L++++ +G+SE F+ +++ R +NEI RH ++ LE++++ELH +F +A V+ QGE ++ IE + + YV G E ++TA E K K Sbjct: 144 MQSEYREKNVERIRRQLKITNAGMVSDEELEQMLDSGQSEVFVSNILKDTQVTR--QALNEISARHSEIQQLERSIRELHDIFTFLATEVEMQGEMINRIEKNILSSADYVERGQEHVKTALENQKKARK 271
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: STX1A_BOVIN (Syntaxin-1A OS=Bos taurus GN=STX1A PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.130e-11 Identity = 38/141 (26.95%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 27 LRKKLKDSMESFNELRQRISSEYRDTVQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTAREVSAK 449 L +K + M +N + + +QR+ +TG + L+ ++ +G F I + + ++EI+ RH + LE +++ELH +F+DMA+LV++QGE +D IE V+ + YV + A + +K Sbjct: 123 LSRKFVEVMSEYNATQSDYRERCKGRIQRQL-EITGRTTTSEELEDMLESGNPAIFASGIIMDSSISK--QALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQSK 260
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: STX4_MOUSE (Syntaxin-4 OS=Mus musculus GN=Stx4 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.927e-11 Identity = 44/156 (28.21%), Postives = 82/156 (52.56%), Query Frame = 3 Query: 18 VNGLRKKLKDSM--ESFNELRQR---ISSEYRDT----VQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTAREVSAKYPK 458 VN KK + + + F EL + + SEYR+ ++R+ ++ L++++ +G+SE F+ +++ R +NEI RH ++ LE++++ELH++F +A V+ QGE ++ IE + + YV G E ++ A E K K Sbjct: 118 VNTRMKKTQHGVLSQQFVELINKCNSMQSEYREKNVERIRRQLKITNAGMVSDEELEQMLDSGQSEVFVSNILKDTQVTR--QALNEISARHSEIQQLERSIRELHEIFTFLATEVEMQGEMINRIEKNILSSADYVERGQEHVKIALENQKKARK 271
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: STX4_RAT (Syntaxin-4 OS=Rattus norvegicus GN=Stx4 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.517e-11 Identity = 44/156 (28.21%), Postives = 81/156 (51.92%), Query Frame = 3 Query: 18 VNGLRKKLKDSM--ESFNELRQR---ISSEYRDT----VQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTAREVSAKYPK 458 VN KK + + + F EL + + SEYR+ ++R+ ++ L++++ +G+SE F+ +++ R +NEI RH ++ LE+ ++ELH++F +A V+ QGE ++ IE + + YV G E ++ A E K K Sbjct: 118 VNTRMKKTQHGVLSQQFVELINKCNSMQSEYREKNVERIRRQLKITNAGMVSDEELEQMLDSGQSEVFVSNILKDTQVTR--QALNEISARHSEIQQLERTIRELHEIFTFLATEVEMQGEMINRIEKNILSSADYVERGQEHVKIALENQKKARK 271 The following BLAST results are available for this feature:
BLAST of CF504382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504382 ID=CF504382; Name=CF504382; organism=Citrus sinensis; type=EST; length=509bpback to top |