CF504388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_NOCFA (Valyl-tRNA synthetase OS=Nocardia farcinica GN=valS PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.387e-25 Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y W ++GYF AD S KP++ IVLPPPNVTG LH+GHAL + DT+ R +RM GY LW+PGMDHAGIATQ VVEK+L Sbjct: 30 YERWVSAGYFTADPASGKPAYSIVLPPPNVTGTLHMGHALDHTLMDTLARRKRMQGYEVLWLPGMDHAGIATQTVVEKQL 109
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_CHRVO (Valyl-tRNA synthetase OS=Chromobacterium violaceum GN=valS PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.118e-25 Identity = 50/81 (61.73%), Postives = 59/81 (72.84%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WE +GYF +SKPSF I LPPPNVTG LH+GHA I D + R+ RM G+N LWVPG DHAGIATQ+VVE++L Sbjct: 17 WYQHWEQAGYFKPSMDTSKPSFAIQLPPPNVTGTLHMGHAFNQTIMDGLTRFYRMKGHNTLWVPGTDHAGIATQIVVERQL 97
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_CHLCV (Valyl-tRNA synthetase OS=Chlamydophila caviae GN=valS PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.118e-25 Identity = 48/80 (60.00%), Postives = 61/80 (76.25%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y++WE SG F A + S KP + I++PPPNVTG LH+GHAL +QD +IR++RMSG+ WVPG DHAGIATQ VVE+ L Sbjct: 20 YAFWEGSGMFTAQSASDKPPYAIIMPPPNVTGILHMGHALVNTLQDVLIRYKRMSGFEVCWVPGTDHAGIATQTVVERHL 99
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYVM_PIG (Valyl-tRNA synthetase, mitochondrial OS=Sus scrofa GN=VARS2 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.118e-25 Identity = 51/86 (59.30%), Postives = 61/86 (70.93%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKP-----SFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WW G+F + ++ P +F + +PPPNVTG+LHIGHALT AIQD ++RW RM G LWVPG DHAGIATQ VVEKKL Sbjct: 113 WYPWWVREGFFKPEYQTRLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDRVLWVPGSDHAGIATQAVVEKKL 198
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_CHLFF (Valyl-tRNA synthetase OS=Chlamydophila felis (strain Fe/C-56) GN=valS PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.072e-25 Identity = 47/80 (58.75%), Postives = 63/80 (78.75%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y++WE++G F A + S+KP + I++PPPNVTG LH+GHAL +QD +IR++RMSG+ WVPG DHAGIATQ VVE+ L Sbjct: 20 YAFWEDAGMFTAQSASNKPPYAIIMPPPNVTGILHMGHALVNTLQDVLIRYKRMSGFEVCWVPGTDHAGIATQTVVERHL 99
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYVC_TAKRU (Valyl-tRNA synthetase OS=Takifugu rubripes GN=vars PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.072e-25 Identity = 51/88 (57.95%), Postives = 62/88 (70.45%), Query Frame = 2 Query: 2 WYSWWENSGYFIAD-------NKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WWE G+F + ++ + F++ +PPPNVTG+LH+GHALT AIQDT+ RW RM G LW PG DHAGIATQVVVEKKL Sbjct: 258 WYPWWEKQGFFKPEFGRKSIGEQNPRGIFMMCIPPPNVTGSLHLGHALTNAIQDTLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 345
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_MYCLE (Valyl-tRNA synthetase OS=Mycobacterium leprae GN=valS PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.318e-25 Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y W NSGYF AD S+KP + IVLPPPNVTG+LH+GHAL + D + R +RM GY LW PGMDHAGIATQ VVEK+L Sbjct: 26 YQKWLNSGYFAADPASTKPGYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGMDHAGIATQSVVEKQL 105
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_DEHE1 (Valyl-tRNA synthetase OS=Dehalococcoides ethenogenes (strain 195) GN=valS PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.318e-25 Identity = 49/81 (60.49%), Postives = 59/81 (72.84%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY +W GYF + S K FVI++PPPNVTG LH+GHALT ++D +IRW RM G ALW+PG DHAGIA QVVVE+ L Sbjct: 23 WYQYWMEKGYFKPNPDSDKKPFVIIMPPPNVTGELHLGHALTATLEDIMIRWHRMLGEPALWLPGADHAGIAAQVVVERML 103
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_PELCD (Valyl-tRNA synthetase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=valS PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.946e-25 Identity = 49/81 (60.49%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY +W +G F AD S K F IV+PPPNVTG LH+GHAL +QD + RW+RM G+ LW PG DHAGIATQ VVEK+L Sbjct: 32 WYEFWTENGLFHADENSPKNPFSIVIPPPNVTGVLHMGHALNNTLQDILARWKRMDGHEVLWQPGTDHAGIATQNVVEKQL 112
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_FUSNN (Valyl-tRNA synthetase OS=Fusobacterium nucleatum subsp. nucleatum GN=valS PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.071e-25 Identity = 50/81 (61.73%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WE+S YF A S K ++ IV+PPPNVTG LH+GH L +IQDT+IR+ RM+G N LW+PG DHAGIATQ VE+KL Sbjct: 17 WYKIWEDSKYFAASLSSEKENYSIVIPPPNVTGILHMGHVLNNSIQDTLIRYNRMTGKNTLWMPGCDHAGIATQNKVERKL 97 The following BLAST results are available for this feature:
BLAST of CF504388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504388 ID=CF504388; Name=CF504388; organism=Citrus sinensis; type=EST; length=245bpback to top |