CF504388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_AZOSE (Valyl-tRNA synthetase OS=Azoarcus sp. (strain EbN1) GN=valS PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.503e-22 Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 2 WYSWWENSGYFIAD-NKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WE+ G+F A +KS+ +F I+LPPPNVTG LH+GH I D + R+ RM G+N LW PG DHAGIATQ+VVE++L Sbjct: 16 WYPEWESRGHFDAGLDKSNPNAFCILLPPPNVTGTLHMGHGFNQTIMDALTRYHRMRGFNTLWQPGTDHAGIATQIVVERQL 97
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_YEAST (Valyl-tRNA synthetase, mitochondrial OS=Saccharomyces cerevisiae GN=VAS1 PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 7.188e-22 Identity = 53/87 (60.92%), Postives = 61/87 (70.11%), Query Frame = 2 Query: 2 WYSWWENSGYF----IADNKSSKPS--FVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WW +G F AD K KP F I PPPNVTGALHIGHALT AIQD++IR+ RM G L++PG DHAGIATQ VVEK++ Sbjct: 157 WYDWWIKTGVFEPEFTADGKV-KPEGVFCIPAPPPNVTGALHIGHALTIAIQDSLIRYNRMKGKTVLFLPGFDHAGIATQSVVEKQI 242
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_SPHWW (Valyl-tRNA synthetase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=valS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.188e-22 Identity = 46/81 (56.79%), Postives = 62/81 (76.54%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY+ WE++G F + ++P + IV+PPPNVTG+LHIGHAL +QD +IR R+ G +ALWV G DHAGIATQ+VVE++L Sbjct: 16 WYAHWEDNGLFRPERPEAEP-YTIVIPPPNVTGSLHIGHALDDTLQDVLIRHARLKGKDALWVVGTDHAGIATQMVVERQL 95
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_RHOBA (Valyl-tRNA synthetase OS=Rhodopirellula baltica GN=valS PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 7.188e-22 Identity = 44/77 (57.14%), Postives = 58/77 (75.32%), Query Frame = 2 Query: 14 WENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 W ++ AD +SSKP F +V+PPPNVTGALH+GH L +QD ++R +RM G+ LW+PG DHAGIATQ VVE++L Sbjct: 21 WTDAKCSHADPESSKPPFSVVIPPPNVTGALHLGHGLNNTLQDIVVRRKRMQGFETLWMPGTDHAGIATQAVVERRL 97
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_MYCS5 (Valyl-tRNA synthetase OS=Mycoplasma synoviae (strain 53) GN=valS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.188e-22 Identity = 49/79 (62.03%), Postives = 59/79 (74.68%), Query Frame = 2 Query: 8 SWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 S W YFI N KP F I+LPPPNVTG LH+GHAL + I DTIIR++++SGY+ LW+PGMDHAGIATQ VE +L Sbjct: 16 SKWREKKYFIDHNLDKKP-FSILLPPPNVTGKLHLGHALDSYIPDTIIRFKKLSGYDVLWLPGMDHAGIATQSKVESEL 93
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_MANSM (Valyl-tRNA synthetase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=valS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.188e-22 Identity = 44/80 (55.00%), Postives = 57/80 (71.25%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y+ WE GYF + +PS+ I +PPPNVTG+LH+GHA + DT+IR+ RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 21 YNHWEQKGYFKPSYDAGRPSYSIAIPPPNVTGSLHMGHAFQQTLMDTLIRYHRMQGDNTLWQAGTDHAGIATQMVVERKI 100
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_LEPIN (Valyl-tRNA synthetase OS=Leptospira interrogans GN=valS PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 7.188e-22 Identity = 48/81 (59.26%), Postives = 60/81 (74.07%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 W S WE F A N +++ SF IV+PPPNVTG+LHIGHAL IQD ++R R G + LW+PGMDHAGIATQ+VVE++L Sbjct: 18 WISLWEKKKSF-APNSNARESFSIVIPPPNVTGSLHIGHALNHTIQDILVRIERKKGKSTLWLPGMDHAGIATQMVVEREL 97
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_LEPIC (Valyl-tRNA synthetase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=valS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.188e-22 Identity = 48/81 (59.26%), Postives = 60/81 (74.07%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 W S WE F A N +++ SF IV+PPPNVTG+LHIGHAL IQD ++R R G + LW+PGMDHAGIATQ+VVE++L Sbjct: 18 WISLWEKKKSF-APNSNARESFSIVIPPPNVTGSLHIGHALNHTIQDILVRIERKKGKSTLWLPGMDHAGIATQMVVEREL 97
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BURPS (Valyl-tRNA synthetase OS=Burkholderia pseudomallei GN=valS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.188e-22 Identity = 46/81 (56.79%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 W WE GY S+P F I LPPPNVTG LH+GHA I D ++R+ RM G+N LWVPG DHAGIATQ+VVE++L Sbjct: 19 WGPEWEKRGYATPALDPSRPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGHNTLWVPGTDHAGIATQIVVERQL 99
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BURMA (Valyl-tRNA synthetase OS=Burkholderia mallei GN=valS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.188e-22 Identity = 46/81 (56.79%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 W WE GY S+P F I LPPPNVTG LH+GHA I D ++R+ RM G+N LWVPG DHAGIATQ+VVE++L Sbjct: 19 WGPEWEKRGYATPALDPSRPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGHNTLWVPGTDHAGIATQIVVERQL 99 The following BLAST results are available for this feature:
BLAST of CF504388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504388 ID=CF504388; Name=CF504388; organism=Citrus sinensis; type=EST; length=245bpback to top |