CF504388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_ACTPJ (Valyl-tRNA synthetase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=valS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.188e-22 Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF S PS+ I +PPPNVTG+LH+GHA + DT+IR+ RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 21 YKHWEEQGYFKPTENPSLPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVERKI 100
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_ACTP7 (Valyl-tRNA synthetase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=valS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.188e-22 Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF S PS+ I +PPPNVTG+LH+GHA + DT+IR+ RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 21 YKHWEEQGYFKPTENPSLPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVERKI 100
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_ACTP2 (Valyl-tRNA synthetase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=valS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.188e-22 Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF S PS+ I +PPPNVTG+LH+GHA + DT+IR+ RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 21 YKHWEEQGYFKPTENPSLPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVERKI 100
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_STAES (Valyl-tRNA synthetase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=valS PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.387e-22 Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y W ++GYF SK ++ IV+PPPNVTG LH+GHA T +QD I R +RM GY+ L++PGMDHAGIATQ VE KL Sbjct: 17 YEEWVSNGYFKPSEDKSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAKVEAKL 96
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_STAEQ (Valyl-tRNA synthetase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=valS PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.387e-22 Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y W ++GYF SK ++ IV+PPPNVTG LH+GHA T +QD I R +RM GY+ L++PGMDHAGIATQ VE KL Sbjct: 17 YEEWVSNGYFKPSEDKSKEAYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAKVEAKL 96
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BUCAP (Valyl-tRNA synthetase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=valS PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.387e-22 Identity = 41/80 (51.25%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y++WE +G+F +N +KP+F I++PPPN+TG LH+GHA I D +IR+ RM G N LW G DHAGIATQ+++E+++ Sbjct: 15 YNFWEKNGFFKPNNNLNKPAFCIMMPPPNITGNLHMGHAFQQTIMDILIRYNRMQGKNTLWQVGTDHAGIATQILIERQI 94
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_AQUAE (Valyl-tRNA synthetase OS=Aquifex aeolicus GN=valS PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.387e-22 Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 W +W + + + F +V+PPPNVTG+LH+GHAL +QD I+RW+RM G +WVPG DHAGIATQ VVEK+L Sbjct: 15 WSRYWIEKALYHVEKPDKRKKFSVVIPPPNVTGSLHMGHALNATLQDVIVRWQRMRGRECVWVPGFDHAGIATQYVVEKQL 95
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_VIBVY (Valyl-tRNA synthetase OS=Vibrio vulnificus (strain YJ016) GN=valS PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.226e-21 Identity = 46/80 (57.50%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF +SK S+ I++PPPNVTG+LH+GHA I DT+IR RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 15 YKTWEEQGYFKPHGDTSKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMVVERKI 94
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_VIBVU (Valyl-tRNA synthetase OS=Vibrio vulnificus GN=valS PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.226e-21 Identity = 46/80 (57.50%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF +SK S+ I++PPPNVTG+LH+GHA I DT+IR RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 15 YKTWEEQGYFKPHGDTSKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMVVERKI 94
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_STAAW (Valyl-tRNA synthetase OS=Staphylococcus aureus (strain MW2) GN=valS PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.226e-21 Identity = 46/80 (57.50%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y W +GYF SK ++ IV+PPPNVTG LH+GHA T +QD I R +RM GY+ L++PGMDHAGIATQ VE KL Sbjct: 17 YEEWVKNGYFKPSEDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDTLYLPGMDHAGIATQAKVEAKL 96 The following BLAST results are available for this feature:
BLAST of CF504388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504388 ID=CF504388; Name=CF504388; organism=Citrus sinensis; type=EST; length=245bpback to top |