CF504388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_DECAR (Valyl-tRNA synthetase OS=Dechloromonas aromatica (strain RCB) GN=valS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.091e-21 Identity = 46/82 (56.10%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKP-SFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WE YF A +SK +F I+LPPPNVTG LH+GH I D + R+ RM G+N LW PG DHAGIATQ+VVE++L Sbjct: 16 WYPEWETQNYFAAGVDASKADNFCILLPPPNVTGTLHMGHGFNQTIMDALTRYYRMRGHNTLWQPGTDHAGIATQIVVERQL 97
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_CAUCR (Valyl-tRNA synthetase OS=Caulobacter crescentus GN=valS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.091e-21 Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y+ WE SG F + FVIV+PPPNVTG+LHIGHAL +QD + R+ RM G ALW+PG DHAGIATQ+VVE++L Sbjct: 16 YAAWEASGAFKPAEDPNAEPFVIVIPPPNVTGSLHIGHALNNTLQDVLTRFHRMRGKAALWLPGTDHAGIATQMVVERQL 95
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_VIBPA (Valyl-tRNA synthetase OS=Vibrio parahaemolyticus GN=valS PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.731e-21 Identity = 45/80 (56.25%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF ++K S+ I++PPPNVTG+LH+GHA I DT+IR RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 15 YQTWEEKGYFKPHGDTTKESYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCERMKGKNTLWQVGTDHAGIATQMVVERKI 94
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_STACT (Valyl-tRNA synthetase OS=Staphylococcus carnosus (strain TM300) GN=valS PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.731e-21 Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y W GYF SK ++ IV+PPPNVTG LH+GHA T +QD + R +RM GY+ L++PGMDHAGIATQ VE KL Sbjct: 17 YQEWVEKGYFRPSGDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDILTRMKRMQGYDTLYLPGMDHAGIATQAKVEAKL 96
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_LISMO (Valyl-tRNA synthetase OS=Listeria monocytogenes GN=valS PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.731e-21 Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WW +F A+ + K + IV+PPPNVTG LH+GHA T +QD I R +RM G++ L++PGMDHAGIATQ VE KL Sbjct: 24 YKWWLEKEFFKAEGNTDKEPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAKVEAKL 103
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_LISMF (Valyl-tRNA synthetase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=valS PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.731e-21 Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WW +F A+ + K + IV+PPPNVTG LH+GHA T +QD I R +RM G++ L++PGMDHAGIATQ VE KL Sbjct: 24 YKWWLEKEFFKAEGNTDKKPYSIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAKVEAKL 103
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_ACIAD (Valyl-tRNA synthetase OS=Acinetobacter sp. (strain ADP1) GN=valS PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.731e-21 Identity = 45/81 (55.56%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WE GYF + SF I++PPPNVTG+LH+GH AI D + R+ RM G N LW PG DHAGIATQ+VVE++L Sbjct: 29 WYQIWEEKGYFKPSGQGD--SFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVERQL 107
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_ZYMMO (Valyl-tRNA synthetase OS=Zymomonas mobilis GN=valS PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 3.567e-21 Identity = 45/81 (55.56%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY+ WE G F + + P F +V+PPPNVTG+LHIGHAL +QD ++R R+ G +ALWV G DHAGIATQ+VVE+ L Sbjct: 16 WYTHWEEEGLFHPERPGADP-FTLVIPPPNVTGSLHIGHALDDTLQDILVRHARLKGKDALWVVGTDHAGIATQMVVERNL 95
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_VIBF1 (Valyl-tRNA synthetase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=valS PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.567e-21 Identity = 45/80 (56.25%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF +SK ++ I++PPPNVTG+LH+GHA I DT+IR RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 15 YQTWEEKGYFKPHGDTSKEAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAERMKGKNTLWQVGTDHAGIATQMVVERKI 94
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_PSEF5 (Valyl-tRNA synthetase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=valS PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.567e-21 Identity = 43/81 (53.09%), Postives = 56/81 (69.14%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WE+ YF S+ I++PPPNVTG+LH+GH AI D +IR+RRM G N LW PG DHAGIATQ++VE+++ Sbjct: 14 WYQTWESENYFAPQGAGD--SYTIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERQI 92 The following BLAST results are available for this feature:
BLAST of CF504388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504388 ID=CF504388; Name=CF504388; organism=Citrus sinensis; type=EST; length=245bpback to top |