CF504388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_PHOPR (Valyl-tRNA synthetase OS=Photobacterium profundum GN=valS PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 3.567e-21 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE +GYF +SK ++ I++PPPNVTG+LH+GHA I DT+IR RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 15 YQRWEEAGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAERMKGKNTLWQVGTDHAGIATQMVVERKI 94
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BARQU (Valyl-tRNA synthetase OS=Bartonella quintana GN=valS PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.567e-21 Identity = 48/79 (60.76%), Postives = 57/79 (72.15%), Query Frame = 2 Query: 14 WENSGYFIADN--KSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WE G F A KS F ++LPPPNVTG+LH+GHAL T IQD ++R+ RM G N LW PGMDHAGIATQ VVE++L Sbjct: 19 WEARGAFKAGMGAKSGTEPFCVMLPPPNVTGSLHMGHALNTTIQDIVVRFERMRGKNVLWQPGMDHAGIATQTVVERQL 97
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_SHEON (Valyl-tRNA synthetase OS=Shewanella oneidensis GN=valS PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.659e-21 Identity = 44/80 (55.00%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF +S+ ++ I++PPPNVTG+LH+GHA I DT+IR++RM G N LW G DHAGIATQ++VE+KL Sbjct: 15 YQNWEEKGYFKPHGDASQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKL 94
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BACSU (Valyl-tRNA synthetase OS=Bacillus subtilis GN=valS PE=1 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 4.659e-21 Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y +W +F A + +K + +V+PPPNVTG LH+GHA T +QD + R +RM GY+ LW+PGMDHAGIATQ VE KL Sbjct: 22 YDFWLKGKFFEAGSDQTKEPYSVVIPPPNVTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAKVEAKL 101
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_ALCBS (Valyl-tRNA synthetase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=valS PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.659e-21 Identity = 45/81 (55.56%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WE +G+F + F I++PPPNVTG+LH+GHA I DT++R+RRM G N LW G DHAGIATQ+VVE+KL Sbjct: 16 WYENWEQAGHFKPSGQGDP--FCIMIPPPNVTGSLHMGHAFQDTIMDTLVRYRRMQGRNTLWQVGTDHAGIATQMVVERKL 94
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_PSEPK (Valyl-tRNA synthetase OS=Pseudomonas putida (strain KT2440) GN=valS PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.085e-21 Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY+ WE+ YF S+ I++PPPNVTG+LH+GH AI D +IR+RRM G + LW PG DHAGIATQ++VE++L Sbjct: 14 WYNTWESENYFAPQGAGE--SYTIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRDTLWQPGTDHAGIATQMLVERQL 92
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_NITMU (Valyl-tRNA synthetase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=valS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.947e-21 Identity = 45/85 (52.94%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 2 WYSWWENSGYF----IADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WYS WE GYF P++ I+LPPPNVTG LH+GHA + D + R+ RM G N LW PG DHAGIATQ+VVE++L Sbjct: 16 WYSRWEGEGYFRPGPAGTAGDQAPAYCIMLPPPNVTGTLHMGHAFQHTLMDALTRYHRMRGDNTLWQPGTDHAGIATQIVVERQL 100
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_WOLSU (Valyl-tRNA synthetase OS=Wolinella succinogenes GN=valS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.038e-20 Identity = 47/85 (55.29%), Postives = 59/85 (69.41%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSS--KPS--FVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 +Y WE GYF + + KP+ F ++LPPPNVTG+LHIGHAL + D + R++RM GY LW PG DHAGIATQ VVEK+L Sbjct: 37 YYKIWETRGYFEVEGNAQIQKPNQNFAVMLPPPNVTGSLHIGHALNHTLIDIMTRYKRMDGYKTLWQPGTDHAGIATQNVVEKRL 121
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BRUME (Valyl-tRNA synthetase OS=Brucella melitensis GN=valS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.038e-20 Identity = 47/80 (58.75%), Postives = 59/80 (73.75%), Query Frame = 2 Query: 14 WENSGYFIADNKSSKPS---FVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WE +G F A +KP F +V+PPPNVTG+LH+GHAL IQD ++R+ RM G N LW PGMDHAGIATQ+VVE++L Sbjct: 19 WEEAGAFKA-GAGAKPGADPFAVVIPPPNVTGSLHMGHALNNTIQDIMVRFERMRGKNVLWQPGMDHAGIATQMVVERQL 97
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_AZOSB (Valyl-tRNA synthetase OS=Azoarcus sp. (strain BH72) GN=valS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.356e-20 Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPS-FVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE+ GYF A +S P+ F I+LPPPNVTG LH+GH I D + R+ RM G N LW PG DHAGIATQ+VVE++L Sbjct: 17 YPEWESRGYFDAGLDTSNPNAFCILLPPPNVTGTLHMGHGFNQTIMDALTRYHRMRGDNTLWQPGTDHAGIATQIVVERQL 97 The following BLAST results are available for this feature:
BLAST of CF504388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504388 ID=CF504388; Name=CF504388; organism=Citrus sinensis; type=EST; length=245bpback to top |