CF504388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYVM_MOUSE (Valyl-tRNA synthetase, mitochondrial OS=Mus musculus GN=Vars2 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.071e-25 Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKP-----SFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WW G+F + ++ P +F + +PPPNVTG+LHIGHALT AIQD ++RW RM G LW+PG DHAGIATQ VVEK+L Sbjct: 113 WYQWWVREGFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDRVLWIPGSDHAGIATQAVVEKQL 198
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYVM_MACMU (Valyl-tRNA synthetase, mitochondrial OS=Macaca mulatta GN=VARS2 PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 9.071e-25 Identity = 50/86 (58.14%), Postives = 61/86 (70.93%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKP-----SFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WW G+F + ++ P +F + +PPPNVTG+LHIGHALT AIQD ++RW RM G LWVPG DHAGIATQ VVEK+L Sbjct: 113 WYPWWVREGFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDQVLWVPGSDHAGIATQAVVEKQL 198
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYVM_HUMAN (Valyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=VARS2 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.071e-25 Identity = 50/86 (58.14%), Postives = 61/86 (70.93%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKP-----SFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WW G+F + ++ P +F + +PPPNVTG+LHIGHALT AIQD ++RW RM G LWVPG DHAGIATQ VVEK+L Sbjct: 113 WYPWWVREGFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDQVLWVPGSDHAGIATQAVVEKQL 198
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_DEHSC (Valyl-tRNA synthetase OS=Dehalococcoides sp. (strain CBDB1) GN=valS PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.185e-24 Identity = 47/81 (58.02%), Postives = 59/81 (72.84%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY +W YF + S K FVI++PPPNVTG LH+GHALT ++D +IRW RM G LW+PG+DHAGIA QVVVE++L Sbjct: 23 WYQYWMEKSYFKPNPNSDKKPFVIIMPPPNVTGELHLGHALTATLEDIMIRWHRMQGEPTLWLPGVDHAGIAAQVVVEREL 103
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYVM_RAT (Valyl-tRNA synthetase, mitochondrial OS=Rattus norvegicus GN=Vars2 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.547e-24 Identity = 49/86 (56.98%), Postives = 60/86 (69.77%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKP-----SFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WW G+F + ++ P +F + +PPPNVTG+LHIGHALT AIQD +RW RM G LW+PG DHAGIATQ VVEK+L Sbjct: 113 WYQWWVREGFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDAFVRWHRMRGDRVLWIPGSDHAGIATQAVVEKQL 198
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYVC_RAT (Valyl-tRNA synthetase OS=Rattus norvegicus GN=Vars PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 2.639e-24 Identity = 51/88 (57.95%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPS-------FVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WWE G+F + S F++ +PPPNVTG+LH+GHALT AIQD++ RW RM G LW PG DHAGIATQVVVEKKL Sbjct: 309 WYPWWERQGFFKPEYGRPSVSAPNPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 396
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYVC_MOUSE (Valyl-tRNA synthetase OS=Mus musculus GN=Vars PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.639e-24 Identity = 51/88 (57.95%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPS-------FVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WWE G+F + S F++ +PPPNVTG+LH+GHALT AIQD++ RW RM G LW PG DHAGIATQVVVEKKL Sbjct: 308 WYPWWERQGFFKPEYGRPSVSAPNPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 395
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYVC_HUMAN (Valyl-tRNA synthetase OS=Homo sapiens GN=VARS PE=1 SV=4) HSP 1 Score: 110.538 bits (275), Expect = 2.639e-24 Identity = 51/88 (57.95%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPS-------FVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WWE G+F + S F++ +PPPNVTG+LH+GHALT AIQD++ RW RM G LW PG DHAGIATQVVVEKKL Sbjct: 309 WYPWWEQQGFFKPEYGRPNVSAANPRGVFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKL 396
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_THIDA (Valyl-tRNA synthetase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=valS PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.447e-24 Identity = 47/81 (58.02%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY+ WE++GYF A +K P++ I+LPPPNVTG LH+GHA + D + R+ RMSG N LW PG DHAGIATQ+VVE++L Sbjct: 16 WYARWESAGYFKARDKPDAPAYCIMLPPPNVTGTLHMGHAFQHTLMDALTRYHRMSGDNTLWQPGTDHAGIATQIVVERQL 96
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYVC_DICDI (Probable valyl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=valS1 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.447e-24 Identity = 50/88 (56.82%), Postives = 63/88 (71.59%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSS-------KPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY +W ++GYF + + FVIV+PPPNVTG+LH+GHALT +IQD ++R+ RM G LWVPG DHAGIATQVVVEKK+ Sbjct: 116 WYDYWLDNGYFSPEKQMEIQPHVVKDKKFVIVIPPPNVTGSLHLGHALTNSIQDAVVRYHRMKGEVCLWVPGTDHAGIATQVVVEKKI 203 The following BLAST results are available for this feature:
BLAST of CF504388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504388 ID=CF504388; Name=CF504388; organism=Citrus sinensis; type=EST; length=245bpback to top |