CF504388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_MYCPU (Valyl-tRNA synthetase OS=Mycoplasma pulmonis GN=valS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.339e-19 Identity = 42/77 (54.55%), Postives = 58/77 (75.32%), Query Frame = 2 Query: 14 WENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 W + YFI + KP F I+LPPPNVTG LH+GHAL +QD++IR++++ GY+ L++P MDHAGIATQ+ VE+ L Sbjct: 18 WIDKKYFINHDLDKKP-FSIILPPPNVTGQLHLGHALNGYLQDSVIRYKKLEGYDVLFLPAMDHAGIATQIKVEESL 93
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_IDILO (Valyl-tRNA synthetase OS=Idiomarina loihiensis GN=valS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.339e-19 Identity = 44/80 (55.00%), Postives = 55/80 (68.75%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE+ GYF K S I++PPPNVTG+LH+GHA I DT+ R++RM G N LW G DHAGIATQ+VVE++L Sbjct: 15 YQQWEDKGYFKPSGKGDPYS--IMIPPPNVTGSLHMGHAFQHTIMDTLTRYQRMDGLNTLWQVGSDHAGIATQMVVERQL 92
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_LACSS (Valyl-tRNA synthetase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=valS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.361e-19 Identity = 43/67 (64.18%), Postives = 52/67 (77.61%), Query Frame = 2 Query: 44 NKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 N +KP + IV+PPPNVTG LH+GHA T +QD +IR +RM GY+ LW+PGMDHAGIATQ VE KL Sbjct: 35 NPDAKP-YSIVIPPPNVTGKLHLGHAWDTTLQDMLIRQKRMQGYDVLWLPGMDHAGIATQAKVEAKL 100
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_SYNY3 (Valyl-tRNA synthetase OS=Synechocystis sp. (strain PCC 6803) GN=valS PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.695e-19 Identity = 39/81 (48.15%), Postives = 56/81 (69.14%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 W + WE S F AD + +V+PPPNVTG+LH+GHA +++ DT++R+ RM G N LW+PG DHA IA Q ++E++L Sbjct: 18 WQTAWEESHAFKADPDRPGEPYCVVIPPPNVTGSLHMGHAFESSLIDTLVRYHRMRGDNTLWLPGTDHASIAVQTILERQL 98
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_PROMT (Valyl-tRNA synthetase OS=Prochlorococcus marinus (strain NATL2A) GN=valS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.695e-19 Identity = 39/81 (48.15%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 W WE G F D + F +V+PPPNVTG+LH+GHA TA+ DT++R++R+ G N L +PG DHA IA Q ++E++L Sbjct: 29 WQKAWEEKGAFKPDPSAPGDPFSVVIPPPNVTGSLHMGHAFNTALIDTVVRYKRLKGNNVLCLPGTDHASIAVQTILERQL 109
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_LACCA (Valyl-tRNA synthetase OS=Lactobacillus casei GN=valS PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 5.695e-19 Identity = 42/81 (51.85%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 + W + + + +K +KP + IV+PPPNVTG LH+GHA T +QD +IR +R+ G++ LW+PGMDHAGIATQ VE KL Sbjct: 23 YQEWLDEDVFKPSGDKKAKP-YSIVIPPPNVTGKLHMGHAWDTTLQDIVIRQKRIEGFDTLWLPGMDHAGIATQAKVEAKL 102
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_GRAFK (Valyl-tRNA synthetase OS=Gramella forsetii (strain KT0803) GN=valS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.695e-19 Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY +W + YF ++ +P + IV+PPPNVTG LH+GH L IQD ++R R+ G NA WVPG DHA IAT+ V KL Sbjct: 16 WYDYWMKNNYFHSEVDDREP-YTIVIPPPNVTGVLHMGHMLNNTIQDVLVRRARLKGLNACWVPGTDHASIATEAKVVAKL 95
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BUCAI (Valyl-tRNA synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=valS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.695e-19 Identity = 40/80 (50.00%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y +WE +G+F N K +F I++PPPN+TG+LH+GHA I D +IR+ RM G N W G DHAGIATQ++VE+++ Sbjct: 15 YFFWEKNGFF-KPNHLEKSTFCIMMPPPNITGSLHMGHAFQQTIMDILIRYHRMQGKNTFWQVGTDHAGIATQILVERQI 93
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_XANC5 (Valyl-tRNA synthetase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=valS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.438e-19 Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y+ WE +GYF+ K + ++LPPPNVTG LH+GHA + D ++R+ RM GY+ LW G DHAGIAT++VV + L Sbjct: 18 YAQWEAAGYFVPSGKGEP--YTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSRNL 95
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_XANAC (Valyl-tRNA synthetase OS=Xanthomonas axonopodis pv. citri GN=valS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.438e-19 Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y+ WE +GYF+ K + ++LPPPNVTG LH+GHA + D ++R+ RM GY+ LW G DHAGIAT++VV + L Sbjct: 18 YAQWEAAGYFVPSGKGEP--YTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSRNL 95 The following BLAST results are available for this feature:
BLAST of CF504388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504388 ID=CF504388; Name=CF504388; organism=Citrus sinensis; type=EST; length=245bpback to top |