CF504388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_XANOR (Valyl-tRNA synthetase OS=Xanthomonas oryzae pv. oryzae GN=valS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.826e-18 Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y+ WE +GYF+ + + ++LPPPNVTG LH+GHA + D ++R+ RM GY+ LW G DHAGIAT++VV + L Sbjct: 18 YAQWEAAGYFVPSDTGEP--YTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSRNL 95
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_XANOP (Valyl-tRNA synthetase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=valS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.826e-18 Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y+ WE +GYF+ + + ++LPPPNVTG LH+GHA + D ++R+ RM GY+ LW G DHAGIAT++VV + L Sbjct: 18 YAQWEAAGYFVPSDTGEP--YTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSRNL 95
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_XANOM (Valyl-tRNA synthetase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=valS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.826e-18 Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y+ WE +GYF+ + + ++LPPPNVTG LH+GHA + D ++R+ RM GY+ LW G DHAGIAT++VV + L Sbjct: 18 YAQWEAAGYFVPSDTGEP--YTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSRNL 95
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_STRMU (Valyl-tRNA synthetase OS=Streptococcus mutans GN=valS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.826e-18 Identity = 41/80 (51.25%), Postives = 52/80 (65.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y W ++ F + IV+PPPNVTG LH+GHA T + D IIR +RM G++ LW+PGMDHAGIATQ VE +L Sbjct: 19 YQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLPDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARL 98
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_HELHP (Valyl-tRNA synthetase OS=Helicobacter hepaticus GN=valS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.826e-18 Identity = 48/87 (55.17%), Postives = 60/87 (68.97%), Query Frame = 2 Query: 2 WYSWWENSGYF-IADNKS-----SKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 +Y+ E GYF I NKS + F I++PPPNVTG LHIGHALT +QD I R++RM G+ L+ PG+DHAGIATQ VV K+L Sbjct: 24 FYAICEKRGYFEIEGNKSLWQGCAPKCFSIMMPPPNVTGVLHIGHALTFTLQDIITRFKRMEGFKTLYQPGLDHAGIATQNVVLKQL 110
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BORPE (Valyl-tRNA synthetase OS=Bordetella pertussis GN=valS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.826e-18 Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 2 WYSWWENSGYFIA----DNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY W GYF A + + +VI PPPNVTG LH+GHA I D ++R+ RM G + ++VPG DHAGIATQ+VVE++L Sbjct: 29 WYDEWAKRGYFDAGRHVETGTDPQPYVIQFPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGDDTVFVPGTDHAGIATQIVVERQL 113
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BORPA (Valyl-tRNA synthetase OS=Bordetella parapertussis GN=valS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.826e-18 Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 2 WYSWWENSGYFIA----DNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY W GYF A + + +VI PPPNVTG LH+GHA I D ++R+ RM G + ++VPG DHAGIATQ+VVE++L Sbjct: 29 WYDEWAKRGYFDAGRHVETGTDPQPYVIQFPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGDDTVFVPGTDHAGIATQIVVERQL 113
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BORBR (Valyl-tRNA synthetase OS=Bordetella bronchiseptica GN=valS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.826e-18 Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 2 WYSWWENSGYFIA----DNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY W GYF A + + +VI PPPNVTG LH+GHA I D ++R+ RM G + ++VPG DHAGIATQ+VVE++L Sbjct: 29 WYDEWAKRGYFDAGRHVETGTDPQPYVIQFPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGDDTVFVPGTDHAGIATQIVVERQL 113
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_MYCHJ (Valyl-tRNA synthetase OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=valS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.691e-18 Identity = 39/77 (50.65%), Postives = 57/77 (74.03%), Query Frame = 2 Query: 14 WENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 W+ G+FIA ++ KP F I+ PPPNVTG LH+GH+ IQD+++R+ ++ G++ L +P +DHAGIATQV VE+ L Sbjct: 18 WQKKGFFIAPKQTKKP-FSIISPPPNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSVDHAGIATQVKVEEDL 93
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_MYCH7 (Valyl-tRNA synthetase OS=Mycoplasma hyopneumoniae (strain 7448) GN=valS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.691e-18 Identity = 39/77 (50.65%), Postives = 57/77 (74.03%), Query Frame = 2 Query: 14 WENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 W+ G+FIA ++ KP F I+ PPPNVTG LH+GH+ IQD+++R+ ++ G++ L +P +DHAGIATQV VE+ L Sbjct: 18 WQKKGFFIAPKQTKKP-FSIISPPPNVTGQLHLGHSWNAFIQDSLVRYHKLQGFDVLLLPSVDHAGIATQVKVEEDL 93 The following BLAST results are available for this feature:
BLAST of CF504388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504388 ID=CF504388; Name=CF504388; organism=Citrus sinensis; type=EST; length=245bpback to top |