CF504388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_UREPA (Valyl-tRNA synthetase OS=Ureaplasma parvum GN=valS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.403e-17 Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 2 Query: 11 WWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 +W+ + F A S+K F IVLPPPNVTG LHIGHA + D ++R++++ GY++ +PG DHAGIATQ EK L Sbjct: 21 FWQENNLFKAQINSTKKPFTIVLPPPNVTGHLHIGHAYDFTLSDILMRYKKLKGYDSFIIPGTDHAGIATQTKFEKNL 98
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_RHOPA (Valyl-tRNA synthetase OS=Rhodopseudomonas palustris GN=valS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.403e-17 Identity = 41/79 (51.90%), Postives = 56/79 (70.89%), Query Frame = 2 Query: 14 WENSGYFIADNKSSKPS--FVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WE++ F A + + + IV+PPPNVTG+LH+GHAL +QD + R+ RM G + LW PG DHAGIATQ+VVE++L Sbjct: 19 WEDAEAFKAGRPERRDAVPYSIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTDHAGIATQMVVERQL 97
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BACTN (Valyl-tRNA synthetase OS=Bacteroides thetaiotaomicron GN=valS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.403e-17 Identity = 41/81 (50.62%), Postives = 50/81 (61.73%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY +W F + +P + IV+PPPNVTG LH+GH L IQD ++R RM G NA WVPG DHA IAT+ V KL Sbjct: 16 WYQYWLEHRLFSSKPDGREP-YTIVIPPPNVTGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKVVNKL 95
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_DESVH (Valyl-tRNA synthetase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=valS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.832e-17 Identity = 42/81 (51.85%), Postives = 51/81 (62.96%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 W WE++ F D + + IV+PPPNVTGALHIGHAL + D + R R G LW+PG DHAGIATQ VVE+ L Sbjct: 19 WRRHWEDNRTFTPDMDAPGEPYSIVIPPPNVTGALHIGHALNHVLIDVLCRNARQQGKKVLWLPGTDHAGIATQNVVERAL 99
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BORBU (Valyl-tRNA synthetase OS=Borrelia burgdorferi GN=valS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.832e-17 Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y+ W + F+ DN S F +V PPPNVTG LH+GHAL +QD ++R++RM +N LW+ G DHAGIATQ V E+ L Sbjct: 19 YTKWLKNNVFLPDN-SLFEKFSMVAPPPNVTGVLHMGHALNFVLQDVLVRYKRMKRHNTLWLFGTDHAGIATQAVFERHL 97
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_STRMK (Valyl-tRNA synthetase OS=Stenotrophomonas maltophilia (strain K279a) GN=valS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.081e-17 Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPS-----FVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE +G+F KPS + I+LPPPNVTG LH+GHA + D ++R+ RM GY+ LW G DHAGIAT++VV + L Sbjct: 18 YEAWEKAGHF-------KPSGTGEPYTILLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSRNL 95
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_STRM5 (Valyl-tRNA synthetase OS=Stenotrophomonas maltophilia (strain R551-3) GN=valS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.081e-17 Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPS-----FVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE +G+F KPS + I+LPPPNVTG LH+GHA + D ++R+ RM GY+ LW G DHAGIAT++VV + L Sbjct: 18 YEAWEKAGHF-------KPSGTGEPYTILLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATEMVVSRNL 95
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_PROMP (Valyl-tRNA synthetase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=valS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.330e-17 Identity = 39/81 (48.15%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 W W++ F + + F IV+PPPNVTG+LH+GHA TA+ D IIR++R+ G N L +PG DHA IA Q ++EK+L Sbjct: 22 WQKRWDSLRAFSPNPSDNGDPFCIVIPPPNVTGSLHMGHAFNTALIDVIIRFQRLLGKNVLCLPGTDHASIAVQTILEKQL 102
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_MYCPN (Valyl-tRNA synthetase OS=Mycoplasma pneumoniae GN=valS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.330e-17 Identity = 38/78 (48.72%), Postives = 51/78 (65.38%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEK 238 Y W ++ +F + +K F +LPPPN+TG LHIGHA +I D I+R++R+ GY W+PG DHAGIATQ EK Sbjct: 21 YDSWSSASFF--KPQKNKVPFTAILPPPNLTGTLHIGHAFEVSITDQIMRFKRLRGYGVNWIPGFDHAGIATQTKYEK 96
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BORGA (Valyl-tRNA synthetase OS=Borrelia garinii GN=valS PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.962e-17 Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y+ W + F+ +N S F +V PPPNVTG LH+GHAL +QD ++R++RM +N LW+ G DHAGIATQ V E+ L Sbjct: 19 YNKWLKNNVFLPNN-SLFEKFSMVAPPPNVTGVLHMGHALNFVLQDILVRYKRMKKHNTLWLFGTDHAGIATQTVFERNL 97 The following BLAST results are available for this feature:
BLAST of CF504388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504388 ID=CF504388; Name=CF504388; organism=Citrus sinensis; type=EST; length=245bpback to top |