CF504388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_GRABC (Valyl-tRNA synthetase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=valS PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.502e-24 Identity = 48/80 (60.00%), Postives = 62/80 (77.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y+ WE+ G F A+ SS F I++PPPNVTG+LH+GHALT +QD+++RWRRM G + LW PG DHAGIATQ+VVE+ L Sbjct: 21 YAGWEHGGAFAANPASSATPFTIMIPPPNVTGSLHMGHALTFTLQDSLVRWRRMQGRDVLWQPGTDHAGIATQMVVERLL 100
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_CHLAB (Valyl-tRNA synthetase OS=Chlamydophila abortus GN=valS PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.880e-24 Identity = 47/80 (58.75%), Postives = 59/80 (73.75%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y++WE S F A S KP + I++PPPNVTG LH+GHAL +QD +IR++RMSG+ WVPG DHAGIATQ VVE+ L Sbjct: 20 YAFWEESTMFTAQAASDKPPYAIIMPPPNVTGILHMGHALVNTLQDVLIRYKRMSGFEVCWVPGTDHAGIATQTVVERHL 99
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_CORDI (Valyl-tRNA synthetase OS=Corynebacterium diphtheriae GN=valS PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.679e-24 Identity = 51/80 (63.75%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y W GYF AD SSKP+F IVLPPPNVTG LH+GHAL + D I R +RM GY LW+PGMDHAGIATQ VE L Sbjct: 39 YEGWVEKGYFTADPSSSKPAFSIVLPPPNVTGQLHMGHALDHTLMDGIARRKRMQGYEVLWLPGMDHAGIATQTKVEAML 118
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_CHLPN (Valyl-tRNA synthetase OS=Chlamydia pneumoniae GN=valS PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.679e-24 Identity = 44/80 (55.00%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y +WE +G F A+ S KP + +++PPPNVTG LH+GHAL +QD ++R++RMSG+ W+PG DHAGIATQ VVE+ L Sbjct: 20 YVFWEKNGMFKAEASSDKPPYSVIMPPPNVTGVLHMGHALVNTLQDVLVRYKRMSGFEVCWIPGTDHAGIATQAVVERHL 99
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYVM_DICDI (Probable valyl-tRNA synthetase, mitochondrial OS=Dictyostelium discoideum GN=valS2 PE=3 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 7.679e-24 Identity = 48/80 (60.00%), Postives = 62/80 (77.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y +W++SG F + + F +VLPPPNVTG+LHIGH+LTT IQD++IR+ RM G LWVPG+DH+GIATQV VEK+L Sbjct: 44 YKYWQDSGLFKPKSNNGGEKFSMVLPPPNVTGSLHIGHSLTTTIQDSLIRYNRMMGKEVLWVPGLDHSGIATQVAVEKEL 123
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_PHOLL (Valyl-tRNA synthetase OS=Photorhabdus luminescens subsp. laumondii GN=valS PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.711e-23 Identity = 48/80 (60.00%), Postives = 61/80 (76.25%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y+ WE SGYF + +S+ SF IV+PPPNVTG+LH+GHA I DT+IR++RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 29 YNHWEKSGYFKPNGDTSRESFCIVIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQSGTDHAGIATQMVVERKI 108
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_MYCPA (Valyl-tRNA synthetase OS=Mycobacterium paratuberculosis GN=valS PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.711e-23 Identity = 49/80 (61.25%), Postives = 59/80 (73.75%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y W ++GYF A+ S KP + IVLPPPNVTG+LH+GHAL + D + R +RM GY LW PGMDHAGIATQ VVEK+L Sbjct: 25 YRQWVDAGYFTANPASDKPGYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGMDHAGIATQSVVEKQL 104
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_LARHH (Valyl-tRNA synthetase OS=Laribacter hongkongensis (strain HLHK9) GN=valS PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.711e-23 Identity = 48/81 (59.26%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WE +GYF + +PSF I LPPPNVTG LH+GHA I D + R+ RM G N LWVPG DHAGIATQ+VVE++L Sbjct: 16 WYDRWEAAGYFKPSMDTDRPSFCIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGDNTLWVPGADHAGIATQIVVERQL 96
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_MESFL (Valyl-tRNA synthetase OS=Mesoplasma florum GN=valS PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.234e-23 Identity = 48/80 (60.00%), Postives = 62/80 (77.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WW + YF A+ S KP F IVLPPPNVTG LHIGHA ++QD IIR+++++G++ L++PGMDHAGI+TQV VE KL Sbjct: 19 YEWWIQNEYFKANPDSKKPKFSIVLPPPNVTGKLHIGHAWDGSLQDAIIRFKKLNGFDVLYLPGMDHAGISTQVKVEAKL 98
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_CAEEL (Valyl-tRNA synthetase OS=Caenorhabditis elegans GN=vrs-2 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.234e-23 Identity = 51/88 (57.95%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 2 WYSWWENSGYFIAD-----NKSSKP--SFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WYSWWE G+F + N S P SF + +PPPNVTG LH+GHAL T ++DTI R+ RM G L+ PG DHAGIATQVVVEK+L Sbjct: 92 WYSWWEKEGFFKPEYIDKLNPGSNPADSFTVCIPPPNVTGNLHVGHALATTVEDTITRFNRMHGKRTLFNPGCDHAGIATQVVVEKRL 179 The following BLAST results are available for this feature:
BLAST of CF504388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504388 ID=CF504388; Name=CF504388; organism=Citrus sinensis; type=EST; length=245bpback to top |