CF504388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_MYCTU (Valyl-tRNA synthetase OS=Mycobacterium tuberculosis GN=valS PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.978e-23 Identity = 48/80 (60.00%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y W ++GYF AD S+KP++ IVLPPPNVTG+LH+GHAL + D + R +RM GY LW PG DHAGIATQ VVE++L Sbjct: 16 YQKWLDAGYFTADPTSTKPAYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSVVEQQL 95
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_MYCMS (Valyl-tRNA synthetase OS=Mycoplasma mycoides subsp. mycoides SC GN=valS PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.978e-23 Identity = 47/80 (58.75%), Postives = 63/80 (78.75%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y +W + F AD S+KP F I+LPPPNVTG LHIGHA T++QD IIR+++++GY+ L++PGMDH+GI+TQV VE KL Sbjct: 19 YQYWLDKNLFKADINSNKPKFSIILPPPNVTGKLHIGHAWDTSLQDAIIRFKKLTGYDTLFLPGMDHSGISTQVKVEAKL 98
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_MYCBO (Valyl-tRNA synthetase OS=Mycobacterium bovis GN=valS PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.978e-23 Identity = 48/80 (60.00%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y W ++GYF AD S+KP++ IVLPPPNVTG+LH+GHAL + D + R +RM GY LW PG DHAGIATQ VVE++L Sbjct: 16 YQKWLDAGYFTADPTSTKPAYSIVLPPPNVTGSLHMGHALEHTMMDALTRRKRMQGYEVLWQPGTDHAGIATQSVVEQQL 95
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_STRCO (Valyl-tRNA synthetase OS=Streptomyces coelicolor GN=valS PE=3 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 6.501e-23 Identity = 47/80 (58.75%), Postives = 57/80 (71.25%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y W GYF AD KS KP + +V+PPPNVTG+LH+GHA + D + R +RM GY LW PGMDHAGIATQ VVE++L Sbjct: 30 YERWVERGYFEADAKSDKPPYTVVIPPPNVTGSLHLGHAFEHTLIDALTRRKRMQGYETLWQPGMDHAGIATQNVVEREL 109
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_GEOKA (Valyl-tRNA synthetase OS=Geobacillus kaustophilus GN=valS PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.501e-23 Identity = 47/80 (58.75%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WW +F A +K F IV+PPPNVTG LH+GHA T +QD I R +RM GY+ LW+PGMDHAGIATQ VE+KL Sbjct: 22 YEWWLKGKFFEATGDPNKRPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKL 101
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BACST (Valyl-tRNA synthetase OS=Bacillus stearothermophilus GN=valS PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.501e-23 Identity = 47/80 (58.75%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WW +F A +K F IV+PPPNVTG LH+GHA T +QD I R +RM GY+ LW+PGMDHAGIATQ VE+KL Sbjct: 22 YEWWLKGKFFEATGDPNKRPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKL 101
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BACHD (Valyl-tRNA synthetase OS=Bacillus halodurans GN=valS PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.501e-23 Identity = 46/81 (56.79%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY +W +F A + +K + IV+PPPNVTG LH+GHA TA+QD + R +RM GY+ LW+PGMDHAGIATQ VE KL Sbjct: 21 WYEYWIEGKFFEATSDETKKPYTIVIPPPNVTGKLHLGHAWDTALQDILSRLKRMQGYDTLWLPGMDHAGIATQAKVEAKL 101
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_THEMA (Valyl-tRNA synthetase OS=Thermotoga maritima GN=valS PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.491e-23 Identity = 46/81 (56.79%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY +WE GYF K F IV+PPPN+TG +H+GHAL +QD ++R++RM GY+ LWVPG DHAGIATQ VEK L Sbjct: 17 WYRYWEEKGYFTPKGVGEK--FSIVIPPPNITGRIHMGHALNITLQDIVVRYKRMKGYDVLWVPGEDHAGIATQNAVEKFL 95
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_JANMA (Valyl-tRNA synthetase OS=Janthinobacterium sp. (strain Marseille) GN=valS PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.491e-23 Identity = 44/81 (54.32%), Postives = 56/81 (69.14%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 W + WE GY+ A + KP+F I LPPPNVTG LH+GH I D + R+ RM G+N W+PG DHAGIATQ+VVE++L Sbjct: 16 WRTEWEKRGYYTATTDADKPAFSIQLPPPNVTGTLHLGHGFNQTIMDGLTRYHRMRGFNTAWIPGTDHAGIATQIVVERQL 96
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_HAEIG (Valyl-tRNA synthetase OS=Haemophilus influenzae (strain PittGG) GN=valS PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.491e-23 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE SGYF + PS+ I +PPPNVTG+LH+GHA + DT+IR+ RM G+N LW G DHAGIATQ+VVE+K+ Sbjct: 21 YQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMVVERKI 100 The following BLAST results are available for this feature:
BLAST of CF504388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504388 ID=CF504388; Name=CF504388; organism=Citrus sinensis; type=EST; length=245bpback to top |